Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1044 ATGGCAATTACACCTCTTGGAAGTACTTCTATTGCACAATGGGGATTTCGTCCTCAGTTTTTCATGAGATCCTGTATGACAGGCAAGATTACATCATCTGGTTGCTGTGTAAGTAGGGTAAGCTTTATGGCTGCCCCAAGTTCAAGCTTTTTTTCTCGTGATTCCTTGCATGCACTATATGACCCGGGTTCATCTCCTATTTCTCATCATCACAAGAGATCAAGGTTGATAGTTAGAGCAGAAACAGATTACTATTCCATCCTCGGGGTCTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAACTATCACCCAGATGTGAACAAAGAACCTGGAGCAGAACAGAAGTTTAAGGAAATTAGCAATGCATATGAGGTCTTATCAGATGATGAGAAGCGATCTATATATGACAGATATGGAGAGGCTGGGCTTAAAGGCTCTGGAATGGGCATGGGGGATTTCAGTAATCCTTTTGATCTGTTTGAGACTCTGTTTGAGGGTATGAATCGCGGCATGAACACCAGAGGTTCCTGGAATGGAGCACTTGATGGTGAGGACGAGTATTATAGTCTTGTCTTGAACTTTAAGGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATAAGCCGACTCGAGAGTTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGAACTAAGCCATCCAGATGTAGCACTTGTGGGGGTCAAGGGAGGGTTGTCTCATCAACAAGGACACCATTGGGTATTTTCCAGCAGTCAATGACATGCTCTTCATGCAATGGGACTGGAGAAATTTCGACACCTTGCAATACATGTTCTGGGGATGGTCGAGTGAGGAGGACAAAGCGGATAAGTTTGAAAGTTCCGGCTGGTGTGGACTCTGCTAGCCGTTTAAGGGTCCGAAATGAAGGAAATGCTGGAAGGCGAGGTGGTTCTCCTGGTGACCTCTTTGTCGTTATTGAAGTTATCCCTGATCCTGTACTTAAACGAGATGACACCAACATTTTATACACTTGTAAGGTATCGTACATAGATGCAATCTTGGGGACTACAATCAAGGTTCCTACTGTAGATGGCATGGTGGATTTAAAAATCCCTGCTGGGACCCAACCGAACACAACACTTGTTATGGCTAGGAAAGGTGTTCCCCTGCTGAGTAAGAGCAATATGAGGGGTGATCAGTTGGTTCGGGTGCAAGTTGAAATTCCTAAGAGACTGAGCAGCGATGAGAGGAAGCTTATTGAGGAACTTGCTGATTTAAGCAAAGCCAAGACTGCGACCAGTAAGAGATAA 1317 0.445 MAITPLGSTSIAQWGFRPQFFMRSCMTGKITSSGCCVSRVSFMAAPSSSFFSRDSLHALYDPGSSPISHHHKRSRLIVRAETDYYSILGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFSNPFDLFETLFEGMNRGMNTRGSWNGALDGEDEYYSLVLNFKEAVFGVEKEIEISRLESCGTCNGSGAKPGTKPSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRVRRTKRISLKVPAGVDSASRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMARKGVPLLSKSNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKAKTATSKR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1044 438 FunFam Putative Mitochondrial DnaJ chaperone 276 326 - -
Dere14g1044 438 SMART dnaj_3 82 139 IPR001623 -
Dere14g1044 438 SUPERFAMILY HSP40/DnaJ peptide-binding domain 189 343 IPR008971 GO:0006457|GO:0051082
Dere14g1044 438 FunFam Chaperone protein dnaJ A6 chloroplastic 80 184 - -
Dere14g1044 438 CDD DnaJ_C 192 414 - -
Dere14g1044 438 CDD DnaJ 83 136 IPR001623 -
Dere14g1044 438 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 45 437 - -
Dere14g1044 438 PRINTS DnaJ domain signature 85 103 IPR001623 -
Dere14g1044 438 PRINTS DnaJ domain signature 103 118 IPR001623 -
Dere14g1044 438 PRINTS DnaJ domain signature 119 139 IPR001623 -
Dere14g1044 438 PRINTS DnaJ domain signature 139 158 IPR001623 -
Dere14g1044 438 Gene3D - 191 326 - -
Dere14g1044 438 Gene3D - 331 438 - -
Dere14g1044 438 Gene3D DnaJ domain 80 184 IPR036869 -
Dere14g1044 438 NCBIfam molecular chaperone DnaJ 83 427 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dere14g1044 438 Pfam DnaJ domain 83 144 IPR001623 -
Dere14g1044 438 CDD DnaJ_zf 221 284 IPR001305 GO:0031072|GO:0051082
Dere14g1044 438 Hamap Chaperone protein DnaJ [dnaJ]. 80 434 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dere14g1044 438 FunFam Molecular chaperone DnaJ 213 289 - -
Dere14g1044 438 SUPERFAMILY Chaperone J-domain 79 176 IPR036869 -
Dere14g1044 438 Pfam DnaJ C terminal domain 196 411 IPR002939 -
Dere14g1044 438 Gene3D - 221 284 - -
Dere14g1044 438 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 422 IPR008971 GO:0006457|GO:0051082
Dere14g1044 438 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Dere14g1044 438 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Dere14g1044 438 Pfam DnaJ central domain 221 284 IPR001305 GO:0031072|GO:0051082
Dere14g1044 438 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 208 287 IPR036410 -
Dere14g1044 438 ProSiteProfiles Zinc finger CR-type profile. 208 289 IPR001305 GO:0031072|GO:0051082
Dere14g1044 438 FunFam Chaperone protein dnaJ 1, mitochondrial 331 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1044 Dere-ChrDere14 10480028 10483770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1044 84 146 C2H2 Transcription Factor Family AT1G74250 42.029 5.13e-09 56.6