Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1036 ATGTCATTCTCTGAGGTTAGTTCCGGGCACTATGAGCAAGAAGTTCATGAAGTTGACTTTCAAAAGTCCTTGGAGAAGCTTCTTGTACCTCCAGACAAACAAAACAAGTGTCTAGGGGAACATGTTCCCCATGAAGAGCTTTTGAATGAGGAAAACAACTATAAAGTAAAATCAGATCTAGAGACTAGTAGAAGCCTGGATGAAATAGGTGACGACACTTATCATACTTTAAAGCAAACTCTCTTAGAAGGATCTGCTACAGAAGAGGGTCTGAAAAAGCTTGACAGTTTCAACCAATGGATGAGTAACGAACTTGGTGATGTAGGTGAACTGAAGATACAATCTACTACTGGTGGGTATTGGGATACAGTTGAAAGTGAAAACGGAGTTGACAACACAACTTTTTCTCCCCATGTGCACTTGAACAACTGTCTTCTGGACCCATCTATTTCCCATTGTCAGCTTTTTAGCATTATTGACTTTTCACCTAGCTGGACATACGAAAACTCAAAAATTAAGGTCCTTATTTCAGGAAAATTCTTAAGGAGCCAACAAGAAGCAGAAAATTGTAAATGGTCATGCATGTTTGGGGAGGAAGAAGTTCCTGCAGAGATTATCAGCAATGGCGTTCTTCGTTGTCATACTCCACTGCACAAGGCTGGGAGGGTTCCTTTCTATATAACATGTTCCAATAGAATAGCATGTAGTGAAGTGCGAGAATTTGATTTCCGAGTCAACCATATTCAAGAAGTCAACACTGCAGATAAGGACAGAGGCAGCATTTTTGAAATGCTTAATATGCGATTTGGAGAACTATTGTCTTTGGGGTCAGCCTTTCCTCAACATTTAGAATCTATTAGTGTAAATGAGAATTATCAGCTGGGAAGCAAAATCAGTTCTTTGCTGAGAGAGGAGAATGACAAATGGGACATATTACTGAAACTTACTTTAGAGAAAGATTTTTCTCCAGAAGATCTACACGAGCAGCTGCTTCAAAAGGTTCTGAAAGAAAAGTTGCTGGCATGGCTCCTTCATAAAATCACTGAAGATGGGAAAGGCCCTAATGTATTAGACGAGGGTGGCCAAGGTGTGCTTCATTTTGCGGCGGCTCTTGGCTATGATTGGGCCCTTCCACCTACGATAGTTTCAGGTGTAAATGTTAACTTTCGTGACATAAATGGATGGACTGCTCTTCATTGGGCAGCATTTTGTTGCAGGGAGCGCACAGTTGCTTCCCTTATCACTCTTGGTGCAGCTCCTGGAGCACTGACTGATCCGTGCCCAAAGTATCCTTCTGGTAGGACACCTGCTGACCTAGCTTCTGCAAATGGACACAAAGGGATTGCAGGGTATCTTGCAGAATCTGCCCTGACTGCGCATCTCTCATCTCTTAATTTGAATAGTGAAGTTGGTGCTAAAGACAATTATGGAGCAAAAGAAGTACAAAGAGTGCAAAAACAATATAATACTACAGTTAATGATGGAGACATATCAAATGGTCTGTCATTGAAAGATTCACTGGCTGCAGTTTGTAATGCCACTCAAGCTGCTGCTCGTATTCATCAAGTTTTCAGAGTGAAGTCATTCCAGAGAAAACAATTGAAAGAATATGGTGATGATAATTTTGAAATATCTGATGAACATGCTCTTTCACTTATAACAATCAAGTCACACAAGGCTGGACAGCATGATGAGCCTGTCCATGCTGCTGCAGTACAAATTCAGAAGAAGTTCCGTAGTTGGAAGGGCAGAAAAGACTTTTTGATAATTCGGCAGCGAATAGTGAAAATTCAGGCTCATGTAAGAGGCCACCAAGTTAGGAAAAACAACAGAAAGATAATATGGTCTGTTGGAATTATGGAGAAGGTTATTTTACGTTGGCGTCGAAAACGCAGTGGTTTACGTGGATTTAAATCAGAAGCCATTAGTGAGGGGACTACGGTACAAGATATGTCTTCCAAGGAGGATGACTATGATTTCCTAAAAGAAGGCAGGAAGCAAACTGAGGAAAGGATGCAGAAAGCCCTGGCCAGGGTGATGTCAATGGTTCAGTATCCAGAGGCCAGAGATCAATACCGGAGGCTGTTGAATGTTGTAAATGAGGTTCATGAAACTCAGGTAAAATATGATAGAACTCTAAACAATTCAGAAGAAACAACCGAATGCGATGACATCATTGATCATGAAGCATTGTTGAACGAAGATACTTATATGCCTACAGCTTAG 2226 0.4106 MSFSEVSSGHYEQEVHEVDFQKSLEKLLVPPDKQNKCLGEHVPHEELLNEENNYKVKSDLETSRSLDEIGDDTYHTLKQTLLEGSATEEGLKKLDSFNQWMSNELGDVGELKIQSTTGGYWDTVESENGVDNTTFSPHVHLNNCLLDPSISHCQLFSIIDFSPSWTYENSKIKVLISGKFLRSQQEAENCKWSCMFGEEEVPAEIISNGVLRCHTPLHKAGRVPFYITCSNRIACSEVREFDFRVNHIQEVNTADKDRGSIFEMLNMRFGELLSLGSAFPQHLESISVNENYQLGSKISSLLREENDKWDILLKLTLEKDFSPEDLHEQLLQKVLKEKLLAWLLHKITEDGKGPNVLDEGGQGVLHFAAALGYDWALPPTIVSGVNVNFRDINGWTALHWAAFCCRERTVASLITLGAAPGALTDPCPKYPSGRTPADLASANGHKGIAGYLAESALTAHLSSLNLNSEVGAKDNYGAKEVQRVQKQYNTTVNDGDISNGLSLKDSLAAVCNATQAAARIHQVFRVKSFQRKQLKEYGDDNFEISDEHALSLITIKSHKAGQHDEPVHAAAVQIQKKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNNRKIIWSVGIMEKVILRWRRKRSGLRGFKSEAISEGTTVQDMSSKEDDYDFLKEGRKQTEERMQKALARVMSMVQYPEARDQYRRLLNVVNEVHETQVKYDRTLNNSEETTECDDIIDHEALLNEDTYMPTA 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1036 741 Pfam IQ calmodulin-binding motif 592 609 IPR000048 GO:0005515
Dere14g1036 741 Pfam IQ calmodulin-binding motif 568 587 IPR000048 GO:0005515
Dere14g1036 741 SMART ANK_2a 393 422 IPR002110 GO:0005515
Dere14g1036 741 SMART ANK_2a 432 461 IPR002110 GO:0005515
Dere14g1036 741 Gene3D Immunoglobulins 151 247 IPR013783 -
Dere14g1036 741 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 558 617 IPR027417 -
Dere14g1036 741 ProSiteProfiles IQ motif profile. 568 596 IPR000048 GO:0005515
Dere14g1036 741 Gene3D - 565 614 - -
Dere14g1036 741 SMART iq_5 589 611 IPR000048 GO:0005515
Dere14g1036 741 SMART iq_5 566 588 IPR000048 GO:0005515
Dere14g1036 741 Coils Coil 658 678 - -
Dere14g1036 741 FunFam Calmodulin-binding transcription activator 2 566 614 - -
Dere14g1036 741 SUPERFAMILY E set domains 158 243 IPR014756 -
Dere14g1036 741 SUPERFAMILY Ankyrin repeat 349 454 IPR036770 -
Dere14g1036 741 FunFam Calmodulin-binding transcription activator 2 151 247 - -
Dere14g1036 741 Pfam IPT/TIG domain 158 231 IPR002909 -
Dere14g1036 741 ProSiteProfiles IQ motif profile. 590 614 IPR000048 GO:0005515
Dere14g1036 741 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 52 705 - -
Dere14g1036 741 Gene3D - 318 468 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1036 Dere-ChrDere14 10409294 10412841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1036 76 735 CAMTA Transcription Factor Family AT2G22300 57.143 0.0 721