Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1017 ATGCCTACTCGCCTTGGCGCTTCCATTTTGAAAGCCCAGCACAGCCATGCCTTTGGTTCCTGGACACGTAATCCTCCTCTTTATTTCACCCCTGGAATCCAGCTCCGAACCTACTCCCCTTTTTTTCCTTCCCTAAAAAACCATTCAATCCTCTCATTTCTTACAGTGACGATGACGCAGCAGAATGTGATGGTTTCGGATGCAAATTCTGGATTCAACATGGCTATTACTGTGGCCGTATCAAACTCGTCCATTTTCGCCACCACGGCACAAAAACCGCCGGCCTCACCTGCAGGGTATATTTCCATTTCCAGGAGAAAAGTGTTGAAGAACCTTGAAATCAATGGGGGAGCTAGAATCAATGCCTGGGTTGACTCCATGAGAGCCTCTTCTCCCACCCATGTCAAATCCACTCCTTCCCTTGCCGAAGACCATAGCTCTTGGATTCTTCACCACCCATCAGCATTAGACATGTTTGACCAAATCATCGATGCTTCAAAAGGGAAGCAAATCGTTATGTTTCTGGACTACGATGGAACGCTCTCGCCAATCGTCGACGACCCCGATCGTGCTTTCATGTCCGACGCAATGAGAAAAACAGTGAGAAAACTTGCAAGGTGTTTTCCCACTGCCATAGTAAGCGGCAGATGCAGAGACAAGGTATACAACTTTGTTCGCTTGGCAGAGCTATATTATGCAGGAAGCCATGGCATGGATATCAAAGGCCCAACAAGATGCTCCAAATACAATAAAGAAAGCAAAGCAGAGGCAATTCATTTTCAACCTGCCAGTGAGTTTCTTCCCATGATAGATGAGGTGTACCAATTGTTAGTTGAGAAAACCAAATCAACACCAGGAGCTAGGGTGGAGAACAACAAGTTCTGCGTCTCTGTTCATTATCGTTGTGTTGATGAGAAGAAATGGAGTGAACTAGCACACCAGGTGAGATCGGTGATAAAGGAATACCCGAAGCTTCGTCTTACCCAAGGAAGGAAGGTATTTGAGATCCGTCCCACTATTAAATGGGACAAAGGGAAGGCCCTGGAATTTCTGTTAGAGTCACTTGGATTTACCAATTGCTCTGATGTCTTTCCTGTCTATATTGGTGATGACCGAACCGATGAAGATGCATTTAAGAAATTAAGAGACAGAGGACAAGGTTTTGGCATTCTAGTGTCAAAATTTCCAAAGGACACAAGTGCATCGTACTCTTTGCAGGAACCTGAGGAGGTGAAGGACTTTCTTCGACGTTTGGTAGAGTGGAAACAAGTATCCCTGCGGGCTCGCTCCAAAGTGTAA 1299 0.4573 MPTRLGASILKAQHSHAFGSWTRNPPLYFTPGIQLRTYSPFFPSLKNHSILSFLTVTMTQQNVMVSDANSGFNMAITVAVSNSSIFATTAQKPPASPAGYISISRRKVLKNLEINGGARINAWVDSMRASSPTHVKSTPSLAEDHSSWILHHPSALDMFDQIIDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDAMRKTVRKLARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGPTRCSKYNKESKAEAIHFQPASEFLPMIDEVYQLLVEKTKSTPGARVENNKFCVSVHYRCVDEKKWSELAHQVRSVIKEYPKLRLTQGRKVFEIRPTIKWDKGKALEFLLESLGFTNCSDVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPEEVKDFLRRLVEWKQVSLRARSKV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1017 432 CDD HAD_TPP 172 411 - -
Dere14g1017 432 NCBIfam trehalose-phosphatase 169 419 IPR003337 GO:0003824|GO:0005992
Dere14g1017 432 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 90 427 IPR044651 GO:0004805|GO:0005992
Dere14g1017 432 SUPERFAMILY HAD-like 172 421 IPR036412 -
Dere14g1017 432 Pfam Trehalose-phosphatase 174 408 IPR003337 GO:0003824|GO:0005992
Dere14g1017 432 NCBIfam HAD-IIB family hydrolase 173 384 IPR006379 -
Dere14g1017 432 FunFam Trehalose 6-phosphate phosphatase 269 428 - -
Dere14g1017 432 Gene3D - 171 264 IPR023214 -
Dere14g1017 432 Gene3D - 269 430 IPR023214 -
Dere14g1017 432 FunFam Trehalose 6-phosphate phosphatase 171 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1017 Dere-ChrDere14 10231620 10235070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1017 167 418 Trehalose Biosynthesis Gene Families AT1G70290 26.394 2.16e-09 57.8