Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1016 ATGGCGGCAGCTCTAGGTTTGTATAATAACAGCAGTAGCATGGCACCAGATTTCTTAGATCCGAGTATTGAAGAGCTGATTAAAGCACATGAACCTTTTATGAAAAGTGATTCATCTGCGTCTTCTCTTTCTCTTCCATCTTCTCCTTTTTTGTATTGTACCTCCTCGCAACCTTCGTGCTCCTACGCTTCACCCACTTGGTTGCCCAGTAATTATCCCAATCTCTGCACTGCATCGAGCTCCCCTATATTTTCTCAGGGATTCTCGAGTCCCCTAGGGCTTAACCAACTCACCCCGTCCCAAATTCTACAGATTCAAGCTCAATTACAGATCCGACAACAACATGCCCTCAACATCCTAAGCCCAAAACCTGTGCCCATGAAACATGTCCTTAATGCTCCGAAGCCCACGAAACTGTATAGAGGAGTGAGGCAGAGGCATTGGGGAAAATGGGTGGCTGAGATCAGACTCCCAAAGAACCGAACCCGTCTCTGGCTCGGCACTTTCGATACTGCCGAAGAGGCGGCTTTGGCATATGACAACGCTGCATATAAGCTTAGGGGAGAGTTTGCTCGCCTTAATTTCCCTCATCTGCGACACCAAGGAGCTCATGTGTATGGTGAATTTGGCAATTACAAGCCCCTCCATTCCTCCGTCGATGCCAAGCTTCGAGCTATTTGTGAAAGCTTGGCCAATTCCCAGAAACAGGGGAGTGCAGGAGAGACTGGTTCTGTCGCTGATTCAAAGCCTACGGTGGTGCTGGATGAGTCAGAATCGAAGAGTGAGGTGGAGGATTGTAAGGTGGAGAACACAACATCGTCGCCCCTGTCGGATGAATCCTGGGCTGGTTCGTCTTCCCCTGAATCCGACATCACTTTCTTGGATTTCTCGGATTCCAAGGACGAAACCCACGACTTTGGGTTGGAGAAGTTTCCTTCCGTGGAGATTGACTGGTCAGCTATTTGA 966 0.4886 MAAALGLYNNSSSMAPDFLDPSIEELIKAHEPFMKSDSSASSLSLPSSPFLYCTSSQPSCSYASPTWLPSNYPNLCTASSSPIFSQGFSSPLGLNQLTPSQILQIQAQLQIRQQHALNILSPKPVPMKHVLNAPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGEFARLNFPHLRHQGAHVYGEFGNYKPLHSSVDAKLRAICESLANSQKQGSAGETGSVADSKPTVVLDESESKSEVEDCKVENTTSSPLSDESWAGSSSPESDITFLDFSDSKDETHDFGLEKFPSVEIDWSAI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1016 321 Gene3D AP2/ERF domain 139 197 IPR036955 GO:0003700|GO:0006355
Dere14g1016 321 PRINTS Ethylene responsive element binding protein signature 162 178 IPR001471 GO:0003700|GO:0006355
Dere14g1016 321 PRINTS Ethylene responsive element binding protein signature 140 151 IPR001471 GO:0003700|GO:0006355
Dere14g1016 321 MobiDBLite consensus disorder prediction 234 296 - -
Dere14g1016 321 MobiDBLite consensus disorder prediction 268 293 - -
Dere14g1016 321 ProSiteProfiles AP2/ERF domain profile. 139 196 IPR001471 GO:0003700|GO:0006355
Dere14g1016 321 SUPERFAMILY DNA-binding domain 139 197 IPR016177 GO:0003677
Dere14g1016 321 Pfam AP2 domain 140 189 IPR001471 GO:0003700|GO:0006355
Dere14g1016 321 FunFam Ethylene-responsive transcription factor 2 138 197 - -
Dere14g1016 321 SMART rav1_2 139 202 IPR001471 GO:0003700|GO:0006355
Dere14g1016 321 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 11 321 - -
Dere14g1016 321 CDD AP2 138 198 IPR001471 GO:0003700|GO:0006355
Dere14g1016 321 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1016 Dere-ChrDere14 10212408 10213373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1016 3 321 AP2-EREBP Transcription Factor Family AT4G39780 50.000 1.20e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere14g1016 AP2 4.8e-15 CL0081