Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1006 ATGGGTTCTTCGGCACTCGAGACCTGCAATTTGGAAGACACAGTGGTGGTGGACATCGAGAAGAAGGGTGAGAATCCTAATGAATGGTCTCACTGGGTGCTCAATGCTCCTGATCCTCCAACTCTGTGGCATGAGCTTGCGGGTTCTACGAGCAAAACCATTTCACACTATCAAGAAAAGTGGTCTTTTCACAGACGCCAATCCGGACCCAAACTAGTGCTCTCGTTCCTCCAGGGCATTTTTCCTATTCTTGAATGGAGTCGAAGCTATACAGCAATGAGTTTCAGGAACGATTTGCTTGCAGGTCTAACTATTGCAAGTCTCTGCATTCCCCAGGGCATTGGGTATGCAACTTTAGCAAAGCTGGATCCTGAGTATGGCCTCTATACAAGTGCTGTGCCACCTCTTATCTATGCAATAATGGGAAGTTCAAGAGAGGTAGCAATTGGACCCGTGGCCGTGGTTTCGCTGCTGTTGTCGTCAATGATTCAGAAATTGATAGACCCATCCACTGATCCAACGGGTTACAGAAAACTTGTTTTCACTGCAACTCTATTTGCTGGCATGTTTGAGGTTGCCTGTGGACTCTTGAGGTTGGGGTTCTTTCTGGATATTCTGTCGCATGCTGCTATAGTTGGATTCATGGCGGGAGCCGCCATAGTTATTGGTCTTCAGCAGCTCAAGGGACTGTTTGGGATCAATCATTTTACCAACAAAACTGACGTCATCTCTGTCATGAAATCTGTTTGGGAATCACTCCATCATCCATGGGAACCCCGCAATTTTGTGCTGGGATGTTCGTTCCTCATTTTCATCCTTCTCACCAGAACTCTGGGTAAAAGGAAGAAAAAACTATTCTGGTTACCAGCAATCTCTCCTCTTGCATCGGTTATACTGTCAACCCTGATTGTTTTTCTCACAAGAGCTGATAAAAATGGAGTTAAAATTGTCAAACACATAAAAGAAGGACTGAATCCAAGCTCTGTCAATCAGTTAGAGTTGAACAGCCCCTATATTGGAGAAATCGCCAAAATTGGGCTTGTTGTTGCTGTTGTTGCACTCACGGAATCTGTTGCTGTTAGCCGGTCTTTTGCTTCCATGAAAGGATACCGCCTTGATGGAAACAAAGAAATGTTGTCCATAGGGTTCACGAACATCATAGGATCATTCACCTCTTGCTATGCTGCAACTGGTTCCTTTTCGCGTACGGCGGTGAATGTGGCGGCGGGTTGTGAAACGGCAGTGTCAAACATTGTGATGGCTATCACGGTCATTATATCGCTGACATGTCTCACGAAGCTCTTGTATTTCACTCCAACGGCGATTCTCGCCTCCATCATCATTTCTGCTCTTCCAGGACTCATAGACCTCAATGAAGCTTACAAGATTTGGAAGCTTGATAAGCTTGACTTCCTTGCTTGCGCTGGAGCCTTCTTTGGAGTCCTTTTCTCTTCCGTCGAGATTGGCCTCCTAGTGGCCGTGGTGATATCCTTTATAAAGATTATTCTGATCTCAATTCGACCTGGCACAGAAACTCCTGGAAGACTCCCTGGGACTGATTTGTTCTGCGATGTCCATCAATATCCTATGGCTGTTAAGACTGCTGGGGTTGTCATAATACGTGTCAAGTCTGCCTTGCTTTGCTTTGCAAATGCCGACTTTGTTAGAGAAAGAATCATGAGATGGATCGCTCACGAAGAAGAAGCAGAGGGGAACAACGGAGACACCAGAAGGGCAATTCAGCTCGTAGTCATTGACGCCTCCAATTTGGTGAACATTGACACCACCGGAATTGCTTCTCTAGAGGAACTGCATGATAGTTTGGTTTCACATGGGAAGCAGTTAGCAATTGCCAACCCCAGGTGGCAAGTGATTCACAAGCTGAAAGCAGCCAACTTTGTCAGAAAAATTGGCGGAAAGGTCTTCTTGACTATTGCAGAAGCTGTTGGGTGTAGGCTGGATTGA 1965 0.459 MGSSALETCNLEDTVVVDIEKKGENPNEWSHWVLNAPDPPTLWHELAGSTSKTISHYQEKWSFHRRQSGPKLVLSFLQGIFPILEWSRSYTAMSFRNDLLAGLTIASLCIPQGIGYATLAKLDPEYGLYTSAVPPLIYAIMGSSREVAIGPVAVVSLLLSSMIQKLIDPSTDPTGYRKLVFTATLFAGMFEVACGLLRLGFFLDILSHAAIVGFMAGAAIVIGLQQLKGLFGINHFTNKTDVISVMKSVWESLHHPWEPRNFVLGCSFLIFILLTRTLGKRKKKLFWLPAISPLASVILSTLIVFLTRADKNGVKIVKHIKEGLNPSSVNQLELNSPYIGEIAKIGLVVAVVALTESVAVSRSFASMKGYRLDGNKEMLSIGFTNIIGSFTSCYAATGSFSRTAVNVAAGCETAVSNIVMAITVIISLTCLTKLLYFTPTAILASIIISALPGLIDLNEAYKIWKLDKLDFLACAGAFFGVLFSSVEIGLLVAVVISFIKIILISIRPGTETPGRLPGTDLFCDVHQYPMAVKTAGVVIIRVKSALLCFANADFVRERIMRWIAHEEEAEGNNGDTRRAIQLVVIDASNLVNIDTTGIASLEELHDSLVSHGKQLAIANPRWQVIHKLKAANFVRKIGGKVFLTIAEAVGCRLD 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1006 654 Gene3D STAS domain 507 652 IPR036513 -
Dere14g1006 654 PANTHER SULFATE TRANSPORTER 64 650 IPR001902 GO:0016020|GO:0055085
Dere14g1006 654 Pfam STAS domain 528 648 IPR002645 -
Dere14g1006 654 NCBIfam sulfate permease 82 645 IPR001902 GO:0016020|GO:0055085
Dere14g1006 654 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020
Dere14g1006 654 SUPERFAMILY SpoIIaa-like 534 649 IPR036513 -
Dere14g1006 654 FunFam Sulfate transporter 31 507 653 - -
Dere14g1006 654 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Dere14g1006 654 ProSiteProfiles STAS domain profile. 547 652 IPR002645 -
Dere14g1006 654 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1006 Dere-ChrDere14 10142511 10152266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1006 21 649 Inorganic Solute Cotransporters AT5G10180 66.137 0.0 874