Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1002 ATGGCAAGCCTACGCCATACAAAATATCTGGGAGTTTCAGAGTTGAGATTGCTTAATATCGGAAAAGAAATGGCAGTCTCCGCTCTAGCCATTACCACTGCATGCCCCAATTCCCTTCAACTCTCTAAATCCGTACTCAACCTCTCTTATTGTTCTCCTTCTTGTCATTCAAAACCATGTAGTTCCAAGCCTAAGCTTTCTTCGACCTCCACGTCTGCTACTAGGAAGACATTTCTTGACATTGGTATTGGAGTTGTAGCAGCTTCAGTGCTAGCGTTGACGCCCTTGGATGCCGGTGCCACTAGAATCGAATACTACGCTACTGTGGGAGATCCTTTATGTGAGCTGAACTATGTTAAGTCCGGTCTTGGTTACTGCGATATTGTTGAAGGGCCTGGGGACGAAGCCCCTCTCGGCGAGCTTATTAATGTTCACTACACTGCAAGATTCGCTGATGGGACTGTCTTTGATAGCAGCTACAAACGCGCTAGACCTCTCACCATGCGCATTGGTGTTGGCAAGGTCATCAAGGGATTGGATCAGGGAATTTTGGGGGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGCAACGTAAGCTAAGGATTCCTCCACAGTTAGCATACGGCCCAGAACCTGCCGGATGCTTTTCAGGTGACTGCAATATACCGGGCAATGCCACTCTTCTGTATGATATTAAATTTGTCGGTATTTACTCCGTGAGTGTGGATCAACTTGTTTGGCAGAGTCTTCTTGCTGATTCCAGCTACCTCGAGTTACTCTTCCTGGTTAGGCGGTCGGGCATGATTGGTATGGATACCCATTTTGAGAGTAATCTTTCATGGTGA 846 0.4728 MASLRHTKYLGVSELRLLNIGKEMAVSALAITTACPNSLQLSKSVLNLSYCSPSCHSKPCSSKPKLSSTSTSATRKTFLDIGIGVVAASVLALTPLDAGATRIEYYATVGDPLCELNYVKSGLGYCDIVEGPGDEAPLGELINVHYTARFADGTVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGQRKLRIPPQLAYGPEPAGCFSGDCNIPGNATLLYDIKFVGIYSVSVDQLVWQSLLADSSYLELLFLVRRSGMIGMDTHFESNLSW 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1002 281 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 136 234 IPR001179 GO:0003755
Dere14g1002 281 FunFam Peptidylprolyl isomerase 111 237 - -
Dere14g1002 281 Gene3D - 113 237 IPR046357 GO:0003755
Dere14g1002 281 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 139 238 IPR001179 GO:0003755
Dere14g1002 281 SUPERFAMILY FKBP-like 118 237 - -
Dere14g1002 281 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 24 239 IPR044183 GO:0009507
Dere14g1002 281 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1002 Dere-ChrDere14 10115463 10118474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1002 115 252 Calmodulin-binding Proteins AT3G25230 37.762 5.02e-16 75.9