Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere14g0993 | ATGAAAGCTCTCTCTGATTTCTTCTTCCATCTCTATGCAAAGACCATAGTCCTATTGGCCTTCCTGCTAATAGAACTCATCCTCCTTATCCGGAACCTCAAGCCGCACCCACCTCCAATCACCATCTCTCAATACCTCGAACTCATTGAGGAGAAAAACCCCACAATTTGTTACACCAAAGGGATGAATGTGGCAGAGCAATTAGACTGCAGGGTGTGCTTGTCCGAGTTTGAAGAAGGCGAGAAAGTTAGGAACTTGAAATGTAAGCACACATTTCACAAGGATTGCTTGGACCAGTGGTTGCTTCAGAGTTGGGCTACTTGTCCTCTCTGTAGAAACAGAGTGCTACCAGATGATGCTGTGACCAAGTATCGCCAGCTTCAGAATCAGGTGAATTATGATGAGAATAATGATCACGAGCAGCACCCAATTATGTCCATATTTGTATTACGTGAGGGAATTGGTCTTCTTTCCCTCGTGGGATTCCTCAGAAGATTAATGATGTACCATCTGCTCTATGTATGA | 525 | 0.4419 | MKALSDFFFHLYAKTIVLLAFLLIELILLIRNLKPHPPPITISQYLELIEEKNPTICYTKGMNVAEQLDCRVCLSEFEEGEKVRNLKCKHTFHKDCLDQWLLQSWATCPLCRNRVLPDDAVTKYRQLQNQVNYDENNDHEQHPIMSIFVLREGIGLLSLVGFLRRLMMYHLLYV | 174 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere14g0993 | 174 | ProSiteProfiles | Zinc finger RING-type profile. | 70 | 112 | IPR001841 | - | |
| Dere14g0993 | 174 | PANTHER | - | 1 | 147 | - | - | |
| Dere14g0993 | 174 | Pfam | Ring finger domain | 69 | 112 | IPR001841 | - | |
| Dere14g0993 | 174 | SMART | ring_2 | 70 | 111 | IPR001841 | - | |
| Dere14g0993 | 174 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 119 | IPR013083 | - | |
| Dere14g0993 | 174 | SUPERFAMILY | RING/U-box | 58 | 121 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere14g0993 | Dere-ChrDere14 | 10019917 | 10020541 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere14g0993 | 69 | 126 | C3H Transcription Factor Family | AT1G15100 | 55.172 | 3.14e-18 | 75.5 |