Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0991 ATGGCGGATCACTCAGACTCTTCGCCTCTAATCCCTCCACCACCGATCACTGACCCTAGCGAGATCGACCTTGAGGCCGGTCCCAGCGAACAAATCCAGTGCCGGATTTGTCTCGAAACTGATGGTAGGGATTTCATAGCTCCTTGCAAGTGCAAAGGCACATCAAAATATGTACATCGAGAATGTTTGGATCATTGGAGAGCTGTTAAGGAAGGTTTTGCATTTGCTCACTGTACAACCTGCAAGGCTCCTTATTATTTGCGAGTTCATGTTGCTGCTGATAGGAAATGGAGAACCTTGAAATTTCGATTTTTTGTTACCAGAGACATTTTGTTTATATTTCTGGCTGCCCAGCTTGTCATTGCTTCACTTGCTTATTTGGTATATTTAATAGATGGTTACCAGCAGTATTGGCTTCGTCTTGTTTGGGGTTTTGATAGTGAGCTTAGCTTTTACTACATATGTGGAGCTCTATTGTTTTTTGCTTTGCTTGGCCTATCTGGGTGCTTCATTACTTGTTATGATCGAAGGGTTCGCAATGATTTGGCTCAGCCATGTCGAGAATTATGTCTTTGTTGCTGTCAACCTGGAGTTTGTGCAGACTGTCATTTGCCAGGCACTCTTTGTATGTGGACTGATTGCACCACATGCTTTGAGAGTTGTGGAACTATGGCTACTGAGTGTGGTGGTTGCTTGGGAGGTGCTGGGGAAGCAGGGTTGCCCTTGTTATTTATAATGGCTTTAATTGTTCTGGGACTTTTTACTGTAATAGGGATATTTTACAGTGTATTGGTGGCTACCATGGTAGGACAGCGGATATGGCAGCGACACTATCATATACTTGCAAAAAGGATGCTAACAAAGGAGTATGTAGTCGAGGATGTTGATGGAGAGATGACAGGGTCTGACTGGTCACCCCCATCTCTCCCACCCGAGCATGTTCAGCAGCTGAAAACACTGGGCCTCCTATGA 972 0.4475 MADHSDSSPLIPPPPITDPSEIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYYLRVHVAADRKWRTLKFRFFVTRDILFIFLAAQLVIASLAYLVYLIDGYQQYWLRLVWGFDSELSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVCADCHLPGTLCMWTDCTTCFESCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPSLPPEHVQQLKTLGLL 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0991 323 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270
Dere14g0991 323 Pfam RING-variant domain 34 81 IPR011016 GO:0008270
Dere14g0991 323 CDD RING_CH-C4HC3_MARCH 34 82 - -
Dere14g0991 323 MobiDBLite consensus disorder prediction 1 22 - -
Dere14g0991 323 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 322 - -
Dere14g0991 323 SMART ringv_2 33 82 IPR011016 GO:0008270
Dere14g0991 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 95 IPR013083 -
Dere14g0991 323 SUPERFAMILY RING/U-box 29 86 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere14g0991 Dere-ChrDere14 10009919 10013526 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0991 1 323 C3H Transcription Factor Family AT2G22120 85.802 0.0 567