Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0955 ATGGGTTGCGTCAATGGCAAACACTCTCCCAATTACGACGAGAGGCTGATACAGAAATATGGTTATGTTAAGCAAAGCAGTGCAGCCAAACCAATCAGCAGCAGTTACAGTAATTCAAGGCCACTTTCCGATAACAAGGTGCGGCTGGAGAGGAAGACGAAAAGGGTTTCAACTTCAAGAGCTGAGAATGCTGGTGGTGGTGGGGCCGTAAGAGTAGAAGTAGGAGGAGAAAGGGTGGTTGCTAGAGAACAGAAGAATGAGGTTGGGAATGTTTCAAAGAGATTTGTGGACAAGAAGATTGGAAAAGATGAATATGTGGATGGCTGGCCTAAGTGGCTGGTTCATAATATACCTGCAAAAGTTTTGGATACTCTGGTCCCTAAGAGTGCTGATTCTTATGAAATGCTCGCCAAGGTAGGACGCGGAACATATAGCAATGTGTACAAAGCCAAAGACAAGGAAACAGGAAAGATTGTTGCCATGAAGAAGGTCCGTTTCGACACATCGGATTCAGAAAGTATAAAGTTCATGGCAAGAGAAATCATGATTCTGCAGAAGCTGGATCATCCCAATGTCATCAAACTTGAAGGCTTAGCCACCTCCAGGATGCAGTACAGTCTTTACCTAGTCTTTGAATACATGCAGTCAGACCTAACTCGAATCATCACCCGCCCCGGGGAGAAACTCACTGAACCACAGATCAAACGTTATATGCAACAACTGCTTTCTGGTCTCCAGCATTGCCATGAGAGGGGAGTGATGCACCGAGATATCAAAGCTTCAAACTTGTTAATAGACAAGAAAGGGGTACTGAAAATTGCAGATTTTGGGCTTGCAAATTCATTTGATCTTAAACCTAAAGGGCCTCTCACAAATCGAGTGGTGACGCTCTGGTATAGAGCTCCTGAACTACTTTTGGGTTCAACGGATTATGGATTTGGCATTGATCTGTGGAGTGCTGGATGCCTATTGGCTGAGATGTTCATTGGAAAGCCAATTATGCCAGGCAGGACTGAGGTTGAACAGCTCCACATGATCTTCAAACTTTGTGGTTCTCCTTCGGAAGATTACTGGAAGAAGTTGAAGCTAATGACAAGCTATCGGCCACCATATTACAAGCCTAATTATGAAGAAGCCTTCCGGGATTTTCCTTCCTCTTTTCTTGGCCTTTTAACTACACTTCTTGATCTTGACCCTAAATATCGTGGCACTGCTGCCTCTGCTCTCCAAAGTGAATTCTTCAAGACTAGTCCATTACCGTGCGACCTTTCAGCGTTACCAGTAATATACAAAGACGAGGATGAGCGCTCACAAATTAAAAGACGCAAGAGGCAAAGGTCATTCAAGAAAGGGCAAATATCTCAAGCAAGTAACGTGAGTCACTCAGGAAAGCATCATATGGCTTCTGGACAACTCTGGAGAGATTCAGAATTGTCCAGACAGAAAAAGAATGTGGAAGCTAGCATATATGGGCAAGAAGCGGGGAACAGTGCAAGGAGCTCGTCGGGCTCAAAACAATATTCGACAGAACGGAGCTTGAATACATCACTGACTCTGTCTCCAGTTTTTCTGTCCAGTACTGAGAAAAAATCTCCCAGGACTGAGGCATATCCTAACGCTCTTAAGAACATCAAGAACTACAGCATCTGGCGGGCCGCAATGAATGGCAAAGAAGGCAATGATCTTGCTCTATTTCGGAGGTCCTTTTCTGCCGTGGATTTTCGAATTGACCTAGACAACTTATCAAACCTCTATGAATTGAATAAGAGGTTGGGCCATCGAAATTGA 1788 0.443 MGCVNGKHSPNYDERLIQKYGYVKQSSAAKPISSSYSNSRPLSDNKVRLERKTKRVSTSRAENAGGGGAVRVEVGGERVVAREQKNEVGNVSKRFVDKKIGKDEYVDGWPKWLVHNIPAKVLDTLVPKSADSYEMLAKVGRGTYSNVYKAKDKETGKIVAMKKVRFDTSDSESIKFMAREIMILQKLDHPNVIKLEGLATSRMQYSLYLVFEYMQSDLTRIITRPGEKLTEPQIKRYMQQLLSGLQHCHERGVMHRDIKASNLLIDKKGVLKIADFGLANSFDLKPKGPLTNRVVTLWYRAPELLLGSTDYGFGIDLWSAGCLLAEMFIGKPIMPGRTEVEQLHMIFKLCGSPSEDYWKKLKLMTSYRPPYYKPNYEEAFRDFPSSFLGLLTTLLDLDPKYRGTAASALQSEFFKTSPLPCDLSALPVIYKDEDERSQIKRRKRQRSFKKGQISQASNVSHSGKHHMASGQLWRDSELSRQKKNVEASIYGQEAGNSARSSSGSKQYSTERSLNTSLTLSPVFLSSTEKKSPRTEAYPNALKNIKNYSIWRAAMNGKEGNDLALFRRSFSAVDFRIDLDNLSNLYELNKRLGHRN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0955 595 SMART serkin_6 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0955 595 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Dere14g0955 595 Pfam Protein kinase domain 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0955 595 PANTHER CELL DIVISION PROTEIN KINASE 131 420 - -
Dere14g0955 595 MobiDBLite consensus disorder prediction 489 513 - -
Dere14g0955 595 MobiDBLite consensus disorder prediction 436 476 - -
Dere14g0955 595 MobiDBLite consensus disorder prediction 44 58 - -
Dere14g0955 595 FunFam Putative serine/threonine-protein kinase 216 452 - -
Dere14g0955 595 SUPERFAMILY Protein kinase-like (PK-like) 128 421 IPR011009 -
Dere14g0955 595 MobiDBLite consensus disorder prediction 450 465 - -
Dere14g0955 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Dere14g0955 595 Gene3D Phosphorylase Kinase; domain 1 122 215 - -
Dere14g0955 595 MobiDBLite consensus disorder prediction 30 68 - -
Dere14g0955 595 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Dere14g0955 595 ProSiteProfiles Protein kinase domain profile. 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0955 595 Gene3D Transferase(Phosphotransferase) domain 1 216 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0955 Dere-ChrDere14 9720852 9724515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0955 128 468 Core Cell Cycle Gene Families AT5G10270 46.092 1.06e-99 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere14g0955 Pkinase 9e-72 CL0016