Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0949 ATGCCAATGATATTTCCAGGTGTTGATAGGGAGAGGGAGATGTCTGCTGTGGTTTCAGCTTTGACCCATGTGGTGTCCGGAGAGGTGCCTTGTGACGGTACGATTCTTCATCAATATCCGGCACACTCAAGTGCATTTGAAGCTTCTGCAACACCATCTTCGTCTTCTTCATCCCATGGTGTTGGTAGCTCTGCTCTAAAGAGAAGTAGGGAAGATGGCACATCCTCAGGGGGAGGTTCATCTTCTTCCCCTGCTCTTCCAACAATTGAAGAATGCTCATGCAGAACAACAGACAGGAGGGAAATGACGAACGCTGTGTATGAATACAGAGCAGAGAATGTAAGGGAACAGGGGAGAAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGAAAGTGGGCTGCAGAAATCAGAGACCCATTCAAAGCAGCAAGAGTGTGGCTAGGCACATTTGAGACAGCAGAAGCAGCAGCCAGAGCGTACGACGAAGCTGCCCTACGATTTCGGGGCAACAAGGCCAAGCTCAATTTCCCTGAAAACGTCACACTTCGCCACCCTCCCCCTGTTCTTCACAGTACTCAGCCTCTTCACCACTTGCAGGGTTATCAATTTTCAGACTTCCCTCTCCCTGGGACTCTCTATGATCACATCATTCACACACCTTCCATGGTTTCTCATCTTCATTCATCCTTGTCGCCGCCGGCAACGTCGTCCTCCTCCTCCGTATCTACCTTTGCTTCGTCACTACCTTCGCTTTATTCCGCGCAGGGTCAGATGAGTGATTCTGCGCATTTGGTACCTTCGCCGTCTTCAACTGTCGGTCACACCTCCTCTTCCTCTGGATGA 846 0.5035 MPMIFPGVDREREMSAVVSALTHVVSGEVPCDGTILHQYPAHSSAFEASATPSSSSSSHGVGSSALKRSREDGTSSGGGSSSSPALPTIEECSCRTTDRREMTNAVYEYRAENVREQGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGNKAKLNFPENVTLRHPPPVLHSTQPLHHLQGYQFSDFPLPGTLYDHIIHTPSMVSHLHSSLSPPATSSSSSVSTFASSLPSLYSAQGQMSDSAHLVPSPSSTVGHTSSSSG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0949 281 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Dere14g0949 281 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Dere14g0949 281 SUPERFAMILY DNA-binding domain 121 179 IPR016177 GO:0003677
Dere14g0949 281 ProSiteProfiles AP2/ERF domain profile. 121 178 IPR001471 GO:0003700|GO:0006355
Dere14g0949 281 SMART rav1_2 121 184 IPR001471 GO:0003700|GO:0006355
Dere14g0949 281 Gene3D AP2/ERF domain 120 180 IPR036955 GO:0003700|GO:0006355
Dere14g0949 281 PANTHER DNA-BINDING DOMAIN 63 239 IPR044808 GO:0003700|GO:0009873
Dere14g0949 281 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Dere14g0949 281 MobiDBLite consensus disorder prediction 258 281 - -
Dere14g0949 281 CDD AP2 121 180 IPR001471 GO:0003700|GO:0006355
Dere14g0949 281 MobiDBLite consensus disorder prediction 47 90 - -
Dere14g0949 281 FunFam Ethylene-responsive transcription factor 2 120 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0949 Dere-ChrDere14 9653964 9655157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0949 115 183 AP2-EREBP Transcription Factor Family AT5G61890 80.556 7.21e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere14g0949 AP2 1.9e-14 CL0081