Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0936 ATGGATTTGGACGATTTCCGATCCATATTGGAGACTGCGGGCGTTGACGTGTGGACCTTCATCGACACCGCTATCACCGTCGCTTCCTTGGATTACGGAAATGATTTGAAGCATCGCAGGGATGGAATCGTTGAGCGCCTCTATGCCGCCACTTCAGCTCCTGTGTCCTGTCGGAATTGCGAACCCAATTATCTTGGGTCTAATGGCCACGGAATCAGCGCTCCAATCAAGAAGGAAATCAGTCCTCCTCCGCCCGACAAAGGACGTGCCTCGCCTGCAACGCCGCAATCCCTTGGTAAAGACGACAACGAAGACGACGAGGAAATAGATCCTTACGGAGGCTTGTTCGACGATGAGCAGAAGAAGATTCTGGAGATTAAAGAGCAACTCGAAGACCCTAACCAGTCTGAAGACTCATTGGTAGAGTTACTACAAAATCTTGCTGACATGGATATTACATTCCAAGCGCTAAAGGAGACTGACATTGGGAGGCACGTGAATCGTTTGCGAAAGCATTTTTCCAATGATGTTCGGAGATTGGTGAAGCTCCTTGTCAGGAAATGGAAAGATATTGTCGATGAATGGGTGAAGTTGAATCCACCAGGAGAGCATGCTACTCTCATGGCTGATGGAGACTCGCCTCAGCAGAAAACTCCACAAAACGGGTATCATCAGATTCCTGATTTTGCATACTCGCCAAATCCACATAATGGGAGTTCTGGGTCAGAAAGGAACAATTCAGAAGCAGAACCAAAACCAAAACCAATTCCTCGGAAAGAAGCTCCTCCCAAACCAACGCCATCTGTCCCTATTCCTGCTTCTGCTCCTCAAAACAGACAGAGAGAACAGAGGGAGAGCAATTTTGACGCGGAGAGACTTGCTTCGGCAAGAAGACGGCTTCAAGAGAACTACAAGGAGGCTGAAAATGCCAAAAAGCAAAGAACGATTCAGGTGATGGACATCCATGAGCTACCAAAACCGAAGGCCAAGAATGCCTTCTTTGGGAAGAACAAAGGCGGGGGCGGTTCTCAGGGAAGGCACTGGTGA 1047 0.4862 MDLDDFRSILETAGVDVWTFIDTAITVASLDYGNDLKHRRDGIVERLYAATSAPVSCRNCEPNYLGSNGHGISAPIKKEISPPPPDKGRASPATPQSLGKDDNEDDEEIDPYGGLFDDEQKKILEIKEQLEDPNQSEDSLVELLQNLADMDITFQALKETDIGRHVNRLRKHFSNDVRRLVKLLVRKWKDIVDEWVKLNPPGEHATLMADGDSPQQKTPQNGYHQIPDFAYSPNPHNGSSGSERNNSEAEPKPKPIPRKEAPPKPTPSVPIPASAPQNRQREQRESNFDAERLASARRRLQENYKEAENAKKQRTIQVMDIHELPKPKAKNAFFGKNKGGGGSQGRHW 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0936 348 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 117 203 IPR035441 -
Dere14g0936 348 SMART TFS2_5 123 194 IPR003617 GO:0005634
Dere14g0936 348 CDD TFIIS_I 120 193 - -
Dere14g0936 348 MobiDBLite consensus disorder prediction 327 348 - -
Dere14g0936 348 ProSiteProfiles TFIIS N-terminal domain profile. 118 195 IPR017923 -
Dere14g0936 348 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 120 203 IPR035441 -
Dere14g0936 348 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 348 IPR044790 -
Dere14g0936 348 Pfam TFIIS helical bundle-like domain 143 192 IPR017923 -
Dere14g0936 348 Coils Coil 290 317 - -
Dere14g0936 348 MobiDBLite consensus disorder prediction 211 246 - -
Dere14g0936 348 MobiDBLite consensus disorder prediction 71 114 - -
Dere14g0936 348 MobiDBLite consensus disorder prediction 205 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0936 Dere-ChrDere14 9550632 9552673 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dere14g0936 Med26 4.4e-12 No_clan