LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere14g0933	ATGACTAAAGCACCCCAATTTAGACTGGTCTGTGATTCGAGGAAGAAAGAAGGAAAGCGAGAAAGAAAAAAAGAAAGAAGCCACCATCCTCAATTTGATGGAAAGTGTCCTTCTTTAACTTCTCCCTTTGAGCCTCGTTTTCGATTGCCCATAAAAGGCGGAACTTGTGTGTGCTTACACTTGAAGCGTCCATCCATTCCCATCTCTCTTGAGGCCTCAAAAAACAGCTACACAATGAAGGAGAATAAGCCCTATCTGGTTGTGATTGTGGTACAAGCAATTTATGCTGGCATGTTTCTCCTCTCTAAAGCTGCTTTCGACCATGGCATGAACAATTTCATCTTCGTCTTCTATAGACAGGCTGCTGCCACCATTTTCTTAACCCCTTTCGCTCTCTTCTTCGAATGGAAAACTGCACCGCCTCTGCCATTCGGGACCTTCTGCAAGATTTTCTTTCTTTCTTTCTTTGGGATTACTTTGAGCTTGGACGTATATGGGATTGCTCTTATTTACACGTCTGCAACTTTAGCTGCTGCTACTACGAACTGCCTTCCAGTCATCACTTTCTTCTTGGCCCTCCTACTCAGGATTGAAAGTTTGAAAGTGAAGACAGCACCTGGGATTGCAAAGTTGGTGGGTATAGTGGCATGCCTGGGTGGTGCAGCAACACTTGCCTTTTACAAAGGCCCTCATTTTCAGCTTTTGGGGAGTCATCACCTTCTGGGGTATTCTCATTCCCATACACAAGCGTATCAAGCTCGTAATATTCCATCTGGTACTTGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAACACCTTTTGGGGGCTATGGCTTGTGCTACAGGCTTTTGTTTTAAAAGGATACCCTTCAAAGCTGCTTCTCACAACCCTACAATGTTTCTTAAGCTCAATTCAGTCTTTTGCCGTCGCCTTTGCCGTAGAAAGAGACATTCAGCAATGGAAGTTGGGTTGGAATGTCAGACTCCTTGCCGTGGCATACTGTGGAATAGTGGTAACGGGTGTGACGTTCTACTTACAAGCATGGCTCATAGAGAAGAAAGGGCCAGTGTTTCTCGCCATGTCCACCCCACTGGCTCTCATCATCACCGTTTTATCATCAGCAATTCTCTTGGGCGAGATCATAACTTTAGGGAGCCTATTAGGAGGCGTGATGCTGGTAATAGGACTATACAGTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCCAAAGCCTCACGTGACTTAGAGCAGGCATCAGGGGTGTGA	1269	0.4586	MTKAPQFRLVCDSRKKEGKRERKKERSHHPQFDGKCPSLTSPFEPRFRLPIKGGTCVCLHLKRPSIPISLEASKNSYTMKENKPYLVVIVVQAIYAGMFLLSKAAFDHGMNNFIFVFYRQAAATIFLTPFALFFEWKTAPPLPFGTFCKIFFLSFFGITLSLDVYGIALIYTSATLAAATTNCLPVITFFLALLLRIESLKVKTAPGIAKLVGIVACLGGAATLAFYKGPHFQLLGSHHLLGYSHSHTQAYQARNIPSGTWIKGCFLMLLSNTFWGLWLVLQAFVLKGYPSKLLLTTLQCFLSSIQSFAVAFAVERDIQQWKLGWNVRLLAVAYCGIVVTGVTFYLQAWLIEKKGPVFLAMSTPLALIITVLSSAILLGEIITLGSLLGGVMLVIGLYSVLWGKSREQMPKASRDLEQASGV	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere14g0933	422	MobiDBLite	consensus disorder prediction	1	37	-	-
	Dere14g0933	422	Pfam	EamA-like transporter family	263	401	IPR000620	GO:0016020
	Dere14g0933	422	Pfam	EamA-like transporter family	83	210	IPR000620	GO:0016020
	Dere14g0933	422	PANTHER	WAT1-RELATED PROTEIN	83	409	IPR030184	GO:0016020\|GO:0022857
	Dere14g0933	422	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	322	406	-	-
	Dere14g0933	422	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	118	229	-	-
	Dere14g0933	422	MobiDBLite	consensus disorder prediction	9	32	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere14g0933	Dere-ChrDere14	9527724	9533264	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere14g0933	79	335	Nodulin-like Gene Family	AT5G64700	63.178	7.36e-98	291