Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0928 ATGCTGGAAATCTCAACTTTACCGGAAAATTCTGGAGCTCCCATCCAGAACCGCTCCGTAGAGGAGGGAGGTAGTAGTGGGCCTGACTCCGATGGGCTCATCAAAGAGCAACAGGAGCTCGCAGGCGACGAGGCTGACCAGAATTCCACCGCTCACCGGTGGCCTCGTGAAGAGGCAATGGCTTTGCTCAAAATAAGGTCCGAGATGGACGTGGCTTTCAGGGATATAAGCCCCAAAGCTCCTCTTTGGCAACAAGTTTCAAGGAGATTAGCGGAGCTAGGATACCATAGGAGTGCAAAGAAATGCAAGGAGAAGTTTGAAAACATTTACAAGTACCATAGAAGGACCAAGGAAGGCCGTTATGGCCGACCCAACCGCAAGACTTATCGTTTCTTTGAGCAACTAGAAGCTCTAGATGCCCACCTACTCCATCCACCTCCAACTTCCGCGGAAATGAATCACACCCCAAATACTACAATCCCACTGGATCCACCTAGTGTTGTTGTTCAGCATGCAGTTCCCTGTTCCACTAGATTCCCTAGTGCAAATAGTATTTCCACCACTTCCTCTTCTGGTAAAGAATCTGGGGAAGCTACACCGAAAAACAAAAGGAAGCTAACTGAGTTTTTCGAGGGGATGATGAAGGAGGTAATAGCGAAGCAAGAGACTTTACACAAGAAAATTATGGAGGTGTTAGAAAAATGCGAACAAGATCAAATAGCTCGGGAGGAAGAATGGAAGATGCAAGAATTAGCTTGGATTGATAGAGAGCGTGAGCTTTTGGCTCAAGAAAGATCTATTGCTGCAGCCAAGGATGCTGCCTTGCTTGCCATCCTGAAGAAGTTAACCGACCAATCAGCTGGTCCAGTGCAGCTACCGGAGAATATTCCAGTTGATCAGAGCCTGATTCCAGATGACACGGATAAGAACAAGCATGAAAATGTTAATGAAGGCAGTACTGTTGGCGTCATGGATAAGCAAGAATGTGCAAATGTTGGGAATTTCATACAAATGAGCTCCTCACGTTGGCCCAAAGAAGAAGTGGAAGCTCTGATTAGATTGAGGACAAACCTGGATATGGATTATCAAGGAAATGAGACGAAGGGACCTCTTTGGGAAGAGATATCTTCGGCGATGAAAAAGCTTGGCTACAATCGCAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATAAATAAATACTTTAAGAGGATGAAGGAAAAAAATAAGAGAAAGCCTGAGGATTCAAAGACATGTCCATATTTTCACCAGCTAGATGCTCTATATAGTAAGAAACCAAGGAAGGTCCAAGAAACAGGTGGTTCTGGGAGCAAGTTTAAGGCGGAGGAGCTATTAATGCATATTATGAGTGGTCAGGAAGAGCGACAATCATCCAAGGATGCTGACAGAGAGAAGACGAACCAGGTTGAAGGAGATAAGGAAGAAGGGAATGAGATGGTACCCAATACTACTTCAATAGCAATCATGGGTTGA 1494 0.4525 MLEISTLPENSGAPIQNRSVEEGGSSGPDSDGLIKEQQELAGDEADQNSTAHRWPREEAMALLKIRSEMDVAFRDISPKAPLWQQVSRRLAELGYHRSAKKCKEKFENIYKYHRRTKEGRYGRPNRKTYRFFEQLEALDAHLLHPPPTSAEMNHTPNTTIPLDPPSVVVQHAVPCSTRFPSANSISTTSSSGKESGEATPKNKRKLTEFFEGMMKEVIAKQETLHKKIMEVLEKCEQDQIAREEEWKMQELAWIDRERELLAQERSIAAAKDAALLAILKKLTDQSAGPVQLPENIPVDQSLIPDDTDKNKHENVNEGSTVGVMDKQECANVGNFIQMSSSRWPKEEVEALIRLRTNLDMDYQGNETKGPLWEEISSAMKKLGYNRSAKRCKEKWENINKYFKRMKEKNKRKPEDSKTCPYFHQLDALYSKKPRKVQETGGSGSKFKAEELLMHIMSGQEERQSSKDADREKTNQVEGDKEEGNEMVPNTTSIAIMG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0928 497 MobiDBLite consensus disorder prediction 179 196 - -
Dere14g0928 497 MobiDBLite consensus disorder prediction 290 316 - -
Dere14g0928 497 MobiDBLite consensus disorder prediction 1 54 - -
Dere14g0928 497 MobiDBLite consensus disorder prediction 454 497 - -
Dere14g0928 497 SUPERFAMILY Homeodomain-like 340 410 IPR009057 -
Dere14g0928 497 Pfam Myb/SANT-like DNA-binding domain 52 138 IPR044822 -
Dere14g0928 497 Pfam Myb/SANT-like DNA-binding domain 341 428 IPR044822 -
Dere14g0928 497 PANTHER FI21293P1 25 483 - -
Dere14g0928 497 MobiDBLite consensus disorder prediction 454 484 - -
Dere14g0928 497 MobiDBLite consensus disorder prediction 1 24 - -
Dere14g0928 497 FunFam Trihelix transcription factor GT-2 343 404 - -
Dere14g0928 497 SMART sant 339 401 IPR001005 -
Dere14g0928 497 SMART sant 50 112 IPR001005 -
Dere14g0928 497 CDD GT1 53 117 - -
Dere14g0928 497 ProSiteProfiles Myb-like domain profile. 46 110 IPR001005 -
Dere14g0928 497 MobiDBLite consensus disorder prediction 179 202 - -
Dere14g0928 497 Gene3D - 54 115 - -
Dere14g0928 497 Gene3D - 343 404 - -
Dere14g0928 497 CDD GT1 341 406 - -
Dere14g0928 497 FunFam Trihelix transcription factor GT-2 54 115 - -
Dere14g0928 497 ProSiteProfiles Myb-like domain profile. 341 399 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0928 Dere-ChrDere14 9502799 9504617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0928 39 432 Trihelix Transcription Factor Family AT1G76880 45.796 2.95e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere14g0928 Myb_DNA-bind_4 6.8e-22 CL0123