LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere14g0922	ATGGAATCCGAGGCCGAGTTTATTTTCTCCGAAAACGTTAGGGTAGGAGACTACGTCCTGAAGGCGAAAATCGGGGAGGGTGCTTTCTCCACTGTTTGGAGAGCTGAGCACAGATTGAGCGGCGAGGAAGTGGCGGTTAAACAAGTGTGCCATTACAGACTCGATCGACGCCTCAAGAGCAGCTTGGACTGCGAAATCAATTTCTTGTCCTCCGTCAGTCATCCTAATATAATTCGCCTTCTCGACTTATTCCAGGAGGATGGATGTGTATACCTAGTCCTGGAGTTTTGTGCTGGGGGAAATTTGGCTTCTTATATTCAGTGCCATGGGAGAGTTCAAGAACAAACTGCCAGAAAATTCATGCAACATCTTGGTTCTGGTTTAAAAACATTACACTATTACGGTATCATTCACAGGGACTTGAAGCCTGAGCATCCTGACAATGAGCCATTGCACTTGATTACTTTTGTGTCTCTTCTTAAATACATAACGCATCTCCACTTTATTTTGCAACCAGCTGCAGATTACTCCATGCTACTAGTTGGGCAGGGGGATTGTGTCAATTTAATAGCATGTACCTGTTGGATGGGAACTTATGTTCTCACCGATAGTCTGTTTATAGTGAATGCACTTCTGAGACCAGAAACAAATTTGTTTGCCTTGGTGCCATTGTTGGACCAGAACATTTTGCTATCAAGCCAAGGGGGTGATGCAGTGCTTAAGATAGCTGATTTTGGTCTATCAAGAACTTTGCGTTCGGGTGAATACGCTGAGACAGTTTGTGGTTCTCCATTATACATGGCCCCCGAAGTTCTTCAATTCCAGATATATGATAACAAGGCGGACATGTGGAGTGTTGGTGCCATTCTCTTTGAGCTTCTCAATGGCTATCCACCGTTTAATGGAAGGAATAATGTTCAGCTATTGAAGAACATCAGATCCTGTGCATGTCTTCCATTTTCTCAGCTGATACTTTCAGGACTGGATCCTGACTGTATTGATATATGTTCTAGATTATTATGCTTAGATCCAGCCGAGCGTCTATCTTTTGATGAATTTTATTGGCACAGGTTTCTAAGAAAAGTAATGGGGTCTTAA	1098	0.4308	MESEAEFIFSENVRVGDYVLKAKIGEGAFSTVWRAEHRLSGEEVAVKQVCHYRLDRRLKSSLDCEINFLSSVSHPNIIRLLDLFQEDGCVYLVLEFCAGGNLASYIQCHGRVQEQTARKFMQHLGSGLKTLHYYGIIHRDLKPEHPDNEPLHLITFVSLLKYITHLHFILQPAADYSMLLVGQGDCVNLIACTCWMGTYVLTDSLFIVNALLRPETNLFALVPLLDQNILLSSQGGDAVLKIADFGLSRTLRSGEYAETVCGSPLYMAPEVLQFQIYDNKADMWSVGAILFELLNGYPPFNGRNNVQLLKNIRSCACLPFSQLILSGLDPDCIDICSRLLCLDPAERLSFDEFYWHRFLRKVMGS	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere14g0922	365	PANTHER	SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED	10	360	IPR045269	GO:0004674\|GO:0006914
	Dere14g0922	365	SUPERFAMILY	Protein kinase-like (PK-like)	14	144	IPR011009	-
	Dere14g0922	365	PIRSF	ILK	211	327	-	-
	Dere14g0922	365	PIRSF	ILK	4	149	-	-
	Dere14g0922	365	ProSiteProfiles	Protein kinase domain profile.	18	359	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g0922	365	ProSitePatterns	Protein kinases ATP-binding region signature.	24	47	IPR017441	GO:0005524
	Dere14g0922	365	SUPERFAMILY	Protein kinase-like (PK-like)	227	362	IPR011009	-
	Dere14g0922	365	FunFam	Aurora kinase A	10	100	-	-
	Dere14g0922	365	Pfam	Protein kinase domain	226	359	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g0922	365	Pfam	Protein kinase domain	18	144	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g0922	365	Gene3D	Transferase(Phosphotransferase) domain 1	10	145	-	-
	Dere14g0922	365	Gene3D	Transferase(Phosphotransferase) domain 1	222	364	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere14g0922	Dere-ChrDere14	9441970	9444975	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere14g0922	10	361	CBL-interacting serine-threonine protein kinases	AT2G25090	27.171	1.11e-28	114

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-3	Dere14g0922		Pkinase	1.8e-29	CL0016