Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0908 ATGGATATCAACCATCAGAACACTACAATATTCACAAATGTTAGCAACACCACTTGGAATCTGGACAAGACGGAAATGGATCACAATCTCCACCACCAAATCCCTATGTGTTCTGCTTGGCCAAACTACCCTAATTACCCTCATCAAGTAGTACCATCTCCATCCTCATCCACCATAATACCCACTTCAGGGTTTCTGAATGACATCGTTTTGGAAGAAGATGAAGATGAAGGAGAAGAAGAGCTGGGAGCCATGAAGGAGATGCTGTACAAGATCGCTGCTATGCAGCCAGTGGACATAGACCCATCCACCATCCGAAAGCCAAAGAGGCGAAACGTCAGAATCAGCGACGACCCACAAAGCGTGGCGGCGAGACACAGGAGAGAGAGGATCAGTGAGAAAATCCGAATCCTCCAAAGACTCGTCCCTGGAGGCACGAAGATGGACACTGCCTCCATGCTCGACGAAGCCATTCGCTATGTCAAGTTCTTGAAGCGACAAATCAGGATACTCCAATCTCAACCCCCACCACCACCCCCACCATGCATTACCAGTACTCTTGCCAGTATTGGGGTTAACAATGTTACAAGTGCAAATCTTCATAGTGATCATTGGCCTTTTGCACCAACAAGTATACTGCACTGTCCCTCCACCGCCACCACCTCCTCCTCTGCCGCCGCCACAGGCATGCCGATCGGGCTGGGATTCGGCGCCGTCGACTATAATCATGAGTCGTGA 738 0.4973 MDINHQNTTIFTNVSNTTWNLDKTEMDHNLHHQIPMCSAWPNYPNYPHQVVPSPSSSTIIPTSGFLNDIVLEEDEDEGEEELGAMKEMLYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRILQSQPPPPPPPCITSTLASIGVNNVTSANLHSDHWPFAPTSILHCPSTATTSSSAAATGMPIGLGFGAVDYNHES 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0908 245 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 26 220 IPR045843 GO:0003700|GO:0006355
Dere14g0908 245 Pfam Helix-loop-helix DNA-binding domain 125 164 IPR011598 GO:0046983
Dere14g0908 245 Gene3D - 118 175 IPR036638 GO:0046983
Dere14g0908 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 175 IPR036638 GO:0046983
Dere14g0908 245 FunFam BHLH transcription factor 118 176 - -
Dere14g0908 245 Coils Coil 154 174 - -
Dere14g0908 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 115 164 IPR011598 GO:0046983
Dere14g0908 245 SMART finulus 121 170 IPR011598 GO:0046983
Dere14g0908 245 CDD bHLH_AtIND_like 116 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0908 Dere-ChrDere14 9275084 9275821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0908 82 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 86.000 2.67e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g0908 HLH 1.2e-06 No_clan