Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0905 ATGGCTGGCTGTCTTCTCCGGTCCTTTTTTCTCACTACCGTCCTTCTCATCCACGTCTCCTCCGCCGCCCACGACGGCCATACCAACCCTACCTCGTCCATTTCCAATGCTCCCCTCCCTATCCAACATGCCTGCAATGCCACGCGCTTCCCCGACCGATGCCTTTCTTCCTTAACCCAATCCAACAACCTCCCTTCCGATCCCACCTCGCTTCAAATCCTCCAATCCGCCATTGCTGTCTCCACCGACAACCTCAAGACCGCCCAATCTATGATCAAGTCCATCCTCGACTCCTCTTCCAAAAATGGTGATCTCAACCGCACCATGGCTGCCAAGAGCTGCTTCACCATCCTGCATGACTCCGAGTACCGCATTTCCCTCGTGAACAACGCCCTCCCGAGCGGCAAGGTCAAGGACGCACGCGCTTGGATGAGCGCCGCATTGGCCTACCAGTACGACTGCTGGTCCGGGTTGAAGTACGTGTACGGTAACGACACCGCCTCCATCAACGACACACTGACCTTCCTGGACTCCCTCACCGAGCATTCCAGCAACGCGCTGAGCATGATGGTGTCGTACGACGTGTTCGGGAACGACACTGCGTCGTGGAAGGCGCCGAGGACGGAGCGCGATGGCTTCTGGGAGGAATCATCGGGAAAGATGCTCGGGTACAGGGGTGGCTTTCCGTTGAATTTGACGGCGAACGTTACGGTTTGTAAGGAGGAAGGGAATGGGTGTTACAAGACGGTGCAGGAAGCCGTTAATGCGGCTCCGGATAACGAGAGTGAAGAGAGGTTTGTGATACACATCAAAGCAGGGGTTTATGAGGAGATGGTTAGGATCCCGATAGAGAAGAAGAACGTGATATTTTTGGGCGACGGCATGGGGAAGACGATCATCACTGGCTCTGCCCATGTAGGTCAGCCAGGAGTGACCACCTACAACTCCGCGACCGTTGCGATTCTTGGGGATGGATTCATGGCAAAGAATCTGACAATCCGAAACACAGCAGGAGCTGATGCTCACCAAGCAGTAGCCTTCAGATCAGACAGCGATCGGTCCGTTCTCGAGTACTGCGAGTTCATAGGCAATCAAGACACCCTATACGCTCATTCCCTTCGCCAATTCTACAAATCGTGTCGAATCCAAGGCAACGTGGATTTCATCTTCGGCAACTCAGCTTCGTTTTTCGAACAGTGCGTGATCCTAGTGAGTCCCAGGCAAAGCGACCCAGAAAAAGGAGAGAACAATGCCGTCACAGCGCATGGCAGGACCGACCCTGCTCAGTCCACAGGCTTTGTTTTCCATAAATGCGTGGTGAATGGGACCCGGGAATACATGGCACAGTACCGCAAGAAGCCAGAGGTGCACAGGAACTTCTTGGGGAGGCCATGGAAGCAATATTCTAGAACTGTGTTCATTCACTGTGTGTTGGAAGCTCTCATCACACCCCAGGGTTGGATGGCCTGGGATGGCGATTTGGGTCTCAACACACTTTACTATGGGGAGACTAAGAATGAAGGGCCTGGTTCTGATGTGGCTAACAGAGTGGCCTGGAGTAGTAAAGTCCCCCACCAACATATATTGGCATATTCCGTGGACGATTTTATTCAAGGAAGTGATTGGATTCCATCGCATTCCTAA 1644 0.5335 MAGCLLRSFFLTTVLLIHVSSAAHDGHTNPTSSISNAPLPIQHACNATRFPDRCLSSLTQSNNLPSDPTSLQILQSAIAVSTDNLKTAQSMIKSILDSSSKNGDLNRTMAAKSCFTILHDSEYRISLVNNALPSGKVKDARAWMSAALAYQYDCWSGLKYVYGNDTASINDTLTFLDSLTEHSSNALSMMVSYDVFGNDTASWKAPRTERDGFWEESSGKMLGYRGGFPLNLTANVTVCKEEGNGCYKTVQEAVNAAPDNESEERFVIHIKAGVYEEMVRIPIEKKNVIFLGDGMGKTIITGSAHVGQPGVTTYNSATVAILGDGFMAKNLTIRNTAGADAHQAVAFRSDSDRSVLEYCEFIGNQDTLYAHSLRQFYKSCRIQGNVDFIFGNSASFFEQCVILVSPRQSDPEKGENNAVTAHGRTDPAQSTGFVFHKCVVNGTREYMAQYRKKPEVHRNFLGRPWKQYSRTVFIHCVLEALITPQGWMAWDGDLGLNTLYYGETKNEGPGSDVANRVAWSSKVPHQHILAYSVDDFIQGSDWIPSHS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0905 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 189 IPR035513 -
Dere14g0905 547 Pfam Pectinesterase 235 539 IPR000070 GO:0030599|GO:0042545
Dere14g0905 547 Pfam Plant invertase/pectin methylesterase inhibitor 41 189 IPR006501 GO:0004857
Dere14g0905 547 NCBIfam pectinesterase inhibitor domain 8 162 IPR006501 GO:0004857
Dere14g0905 547 FunFam Pectinesterase 4 232 547 - -
Dere14g0905 547 FunFam Probable pectinesterase/pectinesterase inhibitor 51 39 192 - -
Dere14g0905 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 192 IPR035513 -
Dere14g0905 547 CDD PMEI-like_3 44 190 - -
Dere14g0905 547 Gene3D - 230 547 IPR012334 -
Dere14g0905 547 SUPERFAMILY Pectin lyase-like 234 545 IPR011050 -
Dere14g0905 547 PANTHER PECTINESTERASE 19 544 - -
Dere14g0905 547 SMART PMEI_2 36 189 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0905 Dere-ChrDere14 9233121 9235420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0905 26 542 Carbohydrate Esterase AT5G09760 62.069 0.0 682