Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0881 ATGGCAGATGGAAGCGTCAACCTTCCTCCTGGGTTTCACTTCTCTCCAACGGATGAAGAACTCGTCCTTCACTTTCTCTACAACAAAGTTTCTCTTTTACCATGCCATCCTAATATCATCCCGGATCTCGATCTTTCAGTGTCTAATCCTTGGGAATTAAATGGTAAGGCTTTGTCAAGCGGAAATCAATACTATTTCTTCACCAAAGTGAACGAGAACAGAACTACAGAAAGTGGGTATTGGAAAGAAATAGGTGTCGCTGAATCTGTAGTCTCAGCCGCTGACAAGAAAGTGGGAATCAAGAAGTACCTCGTATTCAACATAGGAGAAGCCCCAGAAGGCACTGAAACCAGCTGGGTAATGCAAGAGTATCATCTTTACTCATCAGGGTGTAGCACTACATCTTACAGAAGTACAAGAGGAAGACGAAAACCTGATCAAAGCCGGAGCAAATGGGCTTTATGCCGTGTTTATGAAAGGGACAGAGATTCTCAACAGGGTGTGAACTGCTACAATGATGACGAAGATGACAGTAGAACAGAGCTTTCATGGCTGGACGAAGTCTTTTTGTCGTTGGATGATGATCTTGAAGAAAGTAATCTAGCTTATTATTAA 615 0.426 MADGSVNLPPGFHFSPTDEELVLHFLYNKVSLLPCHPNIIPDLDLSVSNPWELNGKALSSGNQYYFFTKVNENRTTESGYWKEIGVAESVVSAADKKVGIKKYLVFNIGEAPEGTETSWVMQEYHLYSSGCSTTSYRSTRGRRKPDQSRSKWALCRVYERDRDSQQGVNCYNDDEDDSRTELSWLDEVFLSLDDDLEESNLAYY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0881 204 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Dere14g0881 204 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Dere14g0881 204 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Dere14g0881 204 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Dere14g0881 204 PANTHER NAC TRANSCRIPTION FACTOR 56 8 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0881 Dere-ChrDere14 9046326 9047159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0881 1 161 NAC Transcription Factor Family AT1G61110 37.288 6.79e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere14g0881 NAM 6e-27 No_clan