Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0869 ATGTTAAAGCACCGCTTGGAGCTCAGCAATCAGTATTTTCTCACCACGGTACCCTGGCTTGTGTTTATGGCAGTTGATGAAGGTGACTTGGAAATTATGGAATTTCAAGACCATAAGGATGATTTCGAAATGATGAATTTTCAAGACCTTCATGATCTTACTTTAGATGACCTGTCGGTTTTTTCTAACTTCCATGAGTTCCCAGAGAACCAGCTGTGTGTACCTCCTGACAGCATAGACGACTTGGAATGGTTCCCCAGCTTCACTGATGATTTTATATCTTTGAATGAAAGCTCCGTTTGTTTTGACAGTGCCAAGCCCAACCATCGCCAACCTCTTAACCATGATCGTGATGAGAAGACAGAGCAAGAAATGGAAAAAGATAGGGTTGGAATTTCAGAGGCAGAGTTGGGTGGAGGGTTTAGGAAGAAGAAGGGTAGGACGAAGATGAAGGCAAAACGGGGTTTAGTGGGGATTAAAAGAAAGAGGTGTAGCCACTGCGAGACGGAAGAGACGCCACAATGGAGGGTTGGGCCTCTTGGGCCGAAGACGTTGTGTAATGCCTGTGGGGTGAGGTTCAAGTCTGGAAGGCTGGTGCCAGAATACCGTCCCGCAGCTAGTCCTACTTTTGATGGCTGTAGGCATTCTAATTATCATAAGAAAATATTGAGAAGACGAGGCTTAGATCGTTAA 693 0.4517 MLKHRLELSNQYFLTTVPWLVFMAVDEGDLEIMEFQDHKDDFEMMNFQDLHDLTLDDLSVFSNFHEFPENQLCVPPDSIDDLEWFPSFTDDFISLNESSVCFDSAKPNHRQPLNHDRDEKTEQEMEKDRVGISEAELGGGFRKKKGRTKMKAKRGLVGIKRKRCSHCETEETPQWRVGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFDGCRHSNYHKKILRRRGLDR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0869 230 FunFam GATA transcription factor 159 208 - -
Dere14g0869 230 CDD ZnF_GATA 163 212 IPR000679 GO:0006355|GO:0043565
Dere14g0869 230 Gene3D - 159 208 IPR013088 GO:0006355|GO:0008270
Dere14g0869 230 MobiDBLite consensus disorder prediction 106 127 - -
Dere14g0869 230 SMART GATA_3 158 208 IPR000679 GO:0006355|GO:0043565
Dere14g0869 230 MobiDBLite consensus disorder prediction 109 127 - -
Dere14g0869 230 PANTHER GATA TRANSCRIPTION FACTOR 138 225 - -
Dere14g0869 230 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 161 220 - -
Dere14g0869 230 Pfam GATA zinc finger 164 197 IPR000679 GO:0006355|GO:0043565
Dere14g0869 230 ProSiteProfiles GATA-type zinc finger domain profile. 162 194 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0869 Dere-ChrDere14 8929317 8930082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0869 72 226 C2C2-Gata Transcription Factor Family AT3G60530 43.293 8.47e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dere14g0869 GATA 2.9e-16 CL0167