Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0867 ATGGAGCTGATCGAACACCGTGAGAAGTTGCAAGGAGACACCGGAAGCGCCACCGAGGAAGGCGGTGCCGGAAGTCAGACGGTCTTGGTGGCCGTGAAGTTGGAGCCTCGGAGCCGGGAACTACTGACTTGGGCTCTCGTCAAAGTCGCTGAACCTGGCGACCTCGTCATTGCGCTTCACGTGCTTGACACTAGTACTAAGGATACAACATCGCTTCCCTCTGTTGTAAAGGCTTTCGATTCTGTTCCCGCGGAATACGAAGGTTTCTGCAACTTAAAGCAGGTTAATCTCAAGTTCAAAGTACATAGAGGTACGTCGGCTAGGAAAATTATAGTAGAGGAGGCGAAGTCGTTTGGTGCAGCGACGGTAGTTGCGGGAACTTCTAACGACCATTACAGAATCCGATCATCGGCGTCCGTAGCAAAGTACTGCGCAAGTAAACTGCCTAAGAGCATATCTGTGTTAGCGGTTGATAATGGCAAAGTTGTATTCCACAGAGAAACCGCTAGTCAAAAAAAATTAAATGGGGGCAAAAGCTTTTCACAAAATTCTATCCCGACCTATCCTAAAGAAAATCTGAGGAACTCCGTCAGTTGTGCCCGGGTGTTAGCACCGCCAGAGAATACCGCAAGTAATCCTACGCAAGGGTTGCCTGATGAACATGAAAAGGAGGATTCGCAGGCTCCAGTACCAATTCAGAAAACTCATAATATTTCCGGTACTTCAATTGTGGTTCAGAAATCAAACCAGTCAAAATCTGGCTGGTTAGAACTGCCCAAAAAGTACATGCAGAAATTTTTTGTGAGAAATGCATCTGTTTCTAAAAGCGCATTTAGACATCCCAACCGGCATTCTTCCCGTTTAGTCCATCCATATCATAAGCAGACAACCACCGTCTATAATGACTTTCTTCTCAAAGAATTGTTGCGCTTACAAGACAAGTACTCATCTTCATGCGCATTATATAGCTTACAAGAACTTGCATCTGCCACTTCCAATTTCGCTTCTGAGAATTTGATTGGCCAAGGTGGTAGCAGTCTTGTTTACAGAGGATATCTACCCGATGGCAAGGAATTGGCAGTGAAAAGTTTAAGGCCATCCCAATATGCACTAGAAGAGTTCGTTCTGGAAATTGACACCATGACGACTTTCCATCACAAGAACATTATATCTCTCTCTGGGTTTTGTTTCGAGGGCAACAATCTAATATTGGTTTACACTTTTTTATCAAGAGGAAGCCTGGAAGAAAACCTTCATGGTAATAAGAAGGACTGCGATGCATTTAGTTGGAACGAGCGGTACAAGGTGGCTGTGGGTGTGGCCGAGGCATTGGATTATCTGCACAATGGCTTCGCACAGGCTGTTATCCATAGGGATGTGAAGTCTGCGAATATCCTTCTTTCTGATGATTTTGACCCTCAGCTCTCGGATTTTGGACTGGCCATTCTGAATTCATCCCATGATGTTTGTACTGATGTGGTTGGAACCTTTGGATATTTAGCTCCAGAATACGTTATGCATGGTAGACTGACAGACAGAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTATCAAGTAAGAAGCCGATTAAGAATGACTGTCCCACGGATCAGGAGAGCCTTGTTATGTGGGCAACGTCAATTTTAAAGGATGGGCAGCTTTCTCAATTGCTTGATCCAAGCTTGGGCGGTGATTACGATCAAAGCCAGATCGAAATAATGGTTTTGGCTGCTACTCTTTGCATCAGACGAGACCCAAGATTTCGACCTCAAATCAACCTTATATTGAGACTTCTGCATGGTGATGAAGAAGTGACAAGATGGGCACAACAAGAAGTTAGAGCACCTCATGAGGAACTTGAAGTCTTGGATGGGGAACCAGTTCGGACTGATAATATTCAGTCCCAAATGGACCTTGCCTTGCTGGACTTGGACTTGAACTCTATCAGTAGCCCTGAGCAAAGAGTCCTAGTGGAGGAATATTTGCGAGGAAGATGA 2007 0.4489 MELIEHREKLQGDTGSATEEGGAGSQTVLVAVKLEPRSRELLTWALVKVAEPGDLVIALHVLDTSTKDTTSLPSVVKAFDSVPAEYEGFCNLKQVNLKFKVHRGTSARKIIVEEAKSFGAATVVAGTSNDHYRIRSSASVAKYCASKLPKSISVLAVDNGKVVFHRETASQKKLNGGKSFSQNSIPTYPKENLRNSVSCARVLAPPENTASNPTQGLPDEHEKEDSQAPVPIQKTHNISGTSIVVQKSNQSKSGWLELPKKYMQKFFVRNASVSKSAFRHPNRHSSRLVHPYHKQTTTVYNDFLLKELLRLQDKYSSSCALYSLQELASATSNFASENLIGQGGSSLVYRGYLPDGKELAVKSLRPSQYALEEFVLEIDTMTTFHHKNIISLSGFCFEGNNLILVYTFLSRGSLEENLHGNKKDCDAFSWNERYKVAVGVAEALDYLHNGFAQAVIHRDVKSANILLSDDFDPQLSDFGLAILNSSHDVCTDVVGTFGYLAPEYVMHGRLTDRIDVYAFGVVLLELLSSKKPIKNDCPTDQESLVMWATSILKDGQLSQLLDPSLGGDYDQSQIEIMVLAATLCIRRDPRFRPQINLILRLLHGDEEVTRWAQQEVRAPHEELEVLDGEPVRTDNIQSQMDLALLDLDLNSISSPEQRVLVEEYLRGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0867 668 CDD USP_Like 27 157 - -
Dere14g0867 668 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 303 408 - -
Dere14g0867 668 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Dere14g0867 668 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0867 668 Pfam Universal stress protein family 26 152 IPR006016 -
Dere14g0867 668 Gene3D HUPs 25 159 IPR014729 -
Dere14g0867 668 Pfam Protein kinase domain 336 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0867 668 MobiDBLite consensus disorder prediction 1 23 - -
Dere14g0867 668 SMART serkin_6 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0867 668 PANTHER OS08G0249100 PROTEIN 78 617 IPR046958 -
Dere14g0867 668 FunFam Putative receptor-like serine/threonine-protein kinase 409 618 - -
Dere14g0867 668 Gene3D Transferase(Phosphotransferase) domain 1 409 622 - -
Dere14g0867 668 SUPERFAMILY Protein kinase-like (PK-like) 315 606 IPR011009 -
Dere14g0867 668 MobiDBLite consensus disorder prediction 205 229 - -
Dere14g0867 668 Gene3D Phosphorylase Kinase; domain 1 298 408 - -
Dere14g0867 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Dere14g0867 668 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 155 - -
Dere14g0867 668 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 25 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0867 Dere-ChrDere14 8919316 8923005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0867 317 598 Trihelix Transcription Factor Family AT1G68690 42.561 1.44e-72 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dere14g0867 Pkinase 1.6e-41 CL0016