Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0855 ATGAAGAGTGAATTAGAGTTACCCCCTGGGTTCAGATTTCACCCAACAGACGAGGAGTTGGTGAATCACTATTTGTGTAGGAAATGTGCTGCGCAGTCCATTGCTGTTCCTATCATCAAAGAGATTGATTTGTATAAGTTTGATCCATGGCACCTTCCAGAAAAGGCTCTGTACGGAGAGAAAGAATGGTACTTCTTCTCGCCGAGGGACAGAAAATATCCAAACGGATCAAGACCGAACAGAGCAGCAGGAAGTGGGTATTGGAAGGCTACAGGAGCAGACAAAGCCATCGGAAAGCCTAAGCCACTTGGAATCAAGAAGGCCCTCGTTTTCTATGCTGGTAAAGCCCCCAAAGGACTCAAAACCAATTGGATCATGCATGAATATCGCCTCGCCAATGTTGATAGGTCTGCTCGCAAGAACAACAACTTGAGGCTTGATGATTGGGTTTTGTGCCGAATTTACAACAAGAAAGGTGTGATTGAGAAATACAATACCCAGGATCAGAAACCAGGGAACGTTTTCTCAGACGTCGATGAGCACGAAACTAAACCAGAAATCAACGCGGTGAACAATGACCAATTGTACATGGACACGTCAGAATCAGTGCCCAGGTTGCACCCGGACTCCAGCTGCTCCGAGCACGTGGTTTCTTCGGATGTCACGTGCTACGACAAGGAGGTGCAGAGTGAGCCCAAGTGGAATGAGCTAGCACAGGGAGTAGGAGATGATGCCTTCAATTTTCAGTTCAATTTCATGGACAGTATGGGAGATGACCCTTTTGCCCCTCAGGTCCTGTACCAAATGAACCAGCTCTCGCCCTTGCAGGACATGTTCATGTATCTCCCTAAACCAATTTGA 861 0.4704 MKSELELPPGFRFHPTDEELVNHYLCRKCAAQSIAVPIIKEIDLYKFDPWHLPEKALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKAIGKPKPLGIKKALVFYAGKAPKGLKTNWIMHEYRLANVDRSARKNNNLRLDDWVLCRIYNKKGVIEKYNTQDQKPGNVFSDVDEHETKPEINAVNNDQLYMDTSESVPRLHPDSSCSEHVVSSDVTCYDKEVQSEPKWNELAQGVGDDAFNFQFNFMDSMGDDPFAPQVLYQMNQLSPLQDMFMYLPKPI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0855 286 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Dere14g0855 286 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Dere14g0855 286 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Dere14g0855 286 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 207 - -
Dere14g0855 286 FunFam NAC transcription factor 16 161 - -
Dere14g0855 286 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0855 Dere-ChrDere14 8797523 8798725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0855 1 285 NAC Transcription Factor Family AT1G01720 64.646 5.94e-128 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere14g0855 NAM 1.3e-38 No_clan