Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0848 ATGGGAGATGGCACTGGAAGTACCGGCTCCAATCGGTCTAACAACAATAGCAGTGGCAATAACAATAAGCCTGAGTGGTTACAACAGTACGATCTGATAGGAAAAATTGGGGAAGGTACCTACGGTCTTGTGTTCCTTGCAAGGATCAAGTCTCCGACGAATCGCGGAAAATCAATTGCTATCAAGAAATTCAAGCAGTCCAAGGATGGCGACGGAGTCTCTCCCACCGCTATCCGTGAAATTATGTTACTCAGGGAGATAACACACGAAAATGTTGTGAAGCTTGTGAATGTGCACATCAATCATGCGGACATGTCTCTGTATCTAGCTTTTGATTATGCTGAACATGACCTATATGAAATCATTAGGCATCACAGGGACAAGGTCAACCATTCTATTAATCAATATACTGTTAAATCATTACTCTGGCAGCTGCTCAATGGACTAAACTATCTGCACAGTAACTGGATAATTCATCGAGATCTGAAGCCATCAAACATATTGGTTATGGGTGAAGGAGAGGAACACGGAGTTGTTAAAATAGCTGACTTTGGACTTGCAAGGATATATCAGGCCCCTCTAAAGCCACTATCTGAAAATGGAGTTGTTGTTACCATTTGGTATCGTGCACCAGAGTTGCTTCTTGGGGCAAAGCATTATACCAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTTTTAACACTGAAGCCACTATTTCAAGGAGCGGAAGTCAAAGCCACACCTAATCCTTTTCAGCTCGATCAACTTGACAAGATATTCAAGGACATTGTTACTGTGCCAGGCCATCCCACATTAGAAAAGTGGCCTTCCCTTGCATATCTTCCCCATTGGCAACAAGATCTGCAGCATATACAGGGGCACAAATATGACAACACTAGCCTTTGTAATGTTGTGCATCTACCTCCGAAAAGTCCTGCATATGATCTTTTGTCAAAGATGCTTGAGTATGATCCTCGAAAGCGAATAACAGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATGGAACCATTGCCTGGGCGGAATGCTCTTGTACCCTGCCAACCTGGGGAGAAAATTGTGAATTATCCCACTCGCCCAGTCGACACGACAACAGATTTTGAAGGGACAGCCAATTTGCAACCTTCTCAACCGGCTTCATCTGGAAATGCTGTTTCTGGCAGCATGACAGGTGGTCATGTATCTAATAGATCTGTCCCTCGGCCAATGAATGTTGTTGGCATGCAAAGGATGCCACCTATGCAAGCTTATAATCTTGCATCCCAGGCAGGGATGGGTGGTGGAATGAATCCTGGCGGAATCCCTATGCCAAGAGGTGTTGCACAGGCCCATCAACAGCAGCAGCAGTTGAGAAGGAAAGACGGTGGAATGATGTTACCTGGATACCCTCCACAGCAGAAGTCAAGACGTAACTAA 1449 0.4472 MGDGTGSTGSNRSNNNSSGNNNKPEWLQQYDLIGKIGEGTYGLVFLARIKSPTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKDIVTVPGHPTLEKWPSLAYLPHWQQDLQHIQGHKYDNTSLCNVVHLPPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQPGEKIVNYPTRPVDTTTDFEGTANLQPSQPASSGNAVSGSMTGGHVSNRSVPRPMNVVGMQRMPPMQAYNLASQAGMGGGMNPGGIPMPRGVAQAHQQQQQLRRKDGGMMLPGYPPQQKSRRN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0848 482 MobiDBLite consensus disorder prediction 442 482 - -
Dere14g0848 482 CDD STKc_CDK8_like 29 344 - -
Dere14g0848 482 MobiDBLite consensus disorder prediction 1 23 - -
Dere14g0848 482 ProSitePatterns Protein kinases ATP-binding region signature. 36 63 IPR017441 GO:0005524
Dere14g0848 482 MobiDBLite consensus disorder prediction 366 411 - -
Dere14g0848 482 PANTHER CELL DIVISION PROTEIN KINASE 28 350 - -
Dere14g0848 482 SMART serkin_6 30 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0848 482 SUPERFAMILY Protein kinase-like (PK-like) 25 346 IPR011009 -
Dere14g0848 482 Gene3D Transferase(Phosphotransferase) domain 1 113 359 - -
Dere14g0848 482 Gene3D Phosphorylase Kinase; domain 1 13 112 - -
Dere14g0848 482 ProSiteProfiles Protein kinase domain profile. 30 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0848 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Dere14g0848 482 FunFam Cyclin-dependent kinase e-1 18 113 - -
Dere14g0848 482 Pfam Protein kinase domain 30 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0848 482 FunFam Putative cyclin-dependent kinase E-1 114 357 - -
Dere14g0848 482 MobiDBLite consensus disorder prediction 369 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0848 Dere-ChrDere14 8741432 8752662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0848 23 481 Core Cell Cycle Gene Families AT5G63610 76.774 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Dere14g0848 Pkinase 2.1e-66 CL0016