Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0823 ATGGGTCGATCTCCTTGTTGTGAAAAGGAGCACACCAACAAAGGAGCTTGGACCAAAGAGGAAGACGAACGCCTCATCAACTATATCAAGCATCATGGCGAAGGCTGCTGGAGATCTCTTCCCAAAGCTGCTGGTTTGCTTAGATGTGGCAAGAGTTGCAGACTCAGATGGATTAATTACCTCCGACCTGATCTCAAGAGAGGAAACTTCACTGAAGAAGAAGACGAGCTCATCATTAACCTCCATAGCCTCCTTGGAAATAAGTATACATCTTCATCCGTCCCTTTCTTTTCTCCCCCCTTAGCTGCGAGGTTACCGGGAAGAACCGACAATGAGATCAAGAACTACTGGAACACCCACATCAAACGGAAGCTCTATAGCCGTGGAATCGACCCTCAAACGCATCGACCCCTCAACGCCCCCACCGCCGCCGCCACCACCGCCACCACCACCACGACGGATACTGTGGCAGTCGTCAGAAGTAACAGCGACGGCTGTAATAACAATAACAACATTAATAACAGCAAATTTCAGTTAGTGACGGAGTTGGGTGGCGCCAAAAATAATATTACGAAGATTATTAGAACCGACTCGGCCGGCGAAGATTCAAATAGCAGCAGCGGAGTTACCACAGAGGAAGCCACCTATGCACATGCTCAACTCAACTTGGAGCTCTCCATAGGCCTTCCCTCTGATCAGCCTTCTTCCGTGAAGCATGACAAGTTGAAACGACAACGACAAGAGCAGCAGCCAGAACGACAAGTTTTGTACCATTGGTATGGCAACTTTAGTAGTACTAGTCAGGGAGTATGTATGTGTTATGGTCTAGGGTTTCAAAGTAAGGATCAAGCATGTAGCTGCAAATTAGCCATGGGTGCTTCTACTGCTCCTCCTCCTGCTCCTACAGTTACTGAAACTGCTACCAATAATCTGTATAGATTTTACACACCCATGAATATTTAG 963 0.4735 MGRSPCCEKEHTNKGAWTKEEDERLINYIKHHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNKYTSSSVPFFSPPLAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAPTAAATTATTTTTDTVAVVRSNSDGCNNNNNINNSKFQLVTELGGAKNNITKIIRTDSAGEDSNSSSGVTTEEATYAHAQLNLELSIGLPSDQPSSVKHDKLKRQRQEQQPERQVLYHWYGNFSSTSQGVCMCYGLGFQSKDQACSCKLAMGASTAPPPAPTVTETATNNLYRFYTPMNI 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0823 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 125 IPR017930 -
Dere14g0823 320 MobiDBLite consensus disorder prediction 236 251 - -
Dere14g0823 320 CDD SANT 16 61 IPR001005 -
Dere14g0823 320 MobiDBLite consensus disorder prediction 228 251 - -
Dere14g0823 320 SMART sant 66 123 IPR001005 -
Dere14g0823 320 SMART sant 13 63 IPR001005 -
Dere14g0823 320 ProSiteProfiles Myb-like domain profile. 62 121 IPR001005 -
Dere14g0823 320 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere14g0823 320 FunFam Myb transcription factor 11 67 - -
Dere14g0823 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Dere14g0823 320 CDD SANT 69 121 IPR001005 -
Dere14g0823 320 SUPERFAMILY Homeodomain-like 13 117 IPR009057 -
Dere14g0823 320 Gene3D - 14 66 - -
Dere14g0823 320 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dere14g0823 320 Pfam Myb-like DNA-binding domain 67 120 IPR001005 -
Dere14g0823 320 Gene3D - 68 147 - -
Dere14g0823 320 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0823 Dere-ChrDere14 8486829 8488011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0823 1 241 MYB Transcription Factor Family AT4G38620 55.602 4.25e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere14g0823 Myb_DNA-binding 8e-09 CL0123