Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0789 ATGGGTTGCGTGCTCGGAGCGCGTACGGATGATGGAGACCGCGGGACGGGTTCCGGAGCTCAGCACCGTCGCCAACAAAACTCTGTTGCTGACGGAGGTAATGCTGATAGGGTTGGAAACGAAGGGATGGCGAGGGAGAGGCGAAGAACTCGGCAGCATACCGGCGATTTTGCAGGAAATCGGACGGCTCCGGAGCGCCGGAAACCTAGTATTGATCCATGCGCTAAAACCGAACAGGGCTGGCCATCTTGGTTGATGGCTGTGGCTGGCGACGCAATCCGAGATTGGACTCCTCGGCGCGCCAACACGTTCGAGAAGCTTGCGAAGATTGGACAAGGGACGTATAGCAATGTATATAAAGCGAGAGACCTTCTTACTGGAAAGATAGTGGCTTTAAAGAAAGTTAGGTTTGATAATCTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCAAATGTCCTGAAACTTGAGGGCTTGGTTACTTCAAGAATGTCATGCAGTCTTTACTTAGTATTCGAGTATATGGAACACGATCTTACCGGACTTGCTGCCGGTCAAGGTGTTAAGTTCACTGAACCTCAGGTGAAATGCTATATGAAGCAACTGCTCTCTGGCCTTGAGCATTGCCACAGCCAAGGTGTCTTGCACCGTGATATCAAGGGTTCTAATCTGCTTATTGATGATGAAGGAATCCTTAAAATTGCAGATTTTGGACTGGCAACTTTCTATGATCCTGAGCAAAAGCAGCCAATGACAAGTAGAGTTGTCACACTTTGGTATCGCCCTCCTGAGCTTCTTCTTGGGGCTACATTCTATGGTGTTGGTATTGACCTCTGGAGTGCAGGCTGCATCTTGGGAGAGCTGCTTACTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTCCACAAAATTTTTAAATTATGTGGCTCTCCTTCTGAGGATTACTGGAAGAAATATAAACTGCCAAATGCTACACTCTTTAAGCCACAACAGCCATATAAACGTTGCGTTTTAGAAACCTTCAAGGATTTCCCTACTTCTTCCTTACCTCTAATCGAAACTCTTCTCTCAATAGATCCTGATGATCGTGGCACTGCCTTGGCTGCTCTAAATAGTGAATTTTTTACCACTGAGCCCTATGCTTGTGAACCATCAAGTTTACCAAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGAGATGAAGAAGCTAGAAGGCAAAAAGCTCTAAATGGGAAAGCTAATGTAGTTGATGGTGCCAGAAGAGTCAGAGTACGTGAGCGAGGTCGGGCCATTCCAGCCCCAGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGATGGAGAGTTGTGACCCATGCAAACGCAAAAAGTAAGAGTGAGAAATTTCCACCACCTCATCAAGATGGAGCTGTTGGATATCCATTGAATGCATCTCAAAAGGGACCTGTTTCGTTTGGTGCCACTGATGCTTCCTTTAGCTCGGCAATATATAATTCAAAACCTTCAGGATCTGTTGGAAGTCATGCTGCTTCAGGACCTTACAGAGGGAAGAAAACCAAGAAAGCTGACTCCCATGTGGGTTCATCATGGAAATTAATGCGAGCATTCAAGCCTTCTATTCATCAATAG 1674 0.4642 MGCVLGARTDDGDRGTGSGAQHRRQQNSVADGGNADRVGNEGMARERRRTRQHTGDFAGNRTAPERRKPSIDPCAKTEQGWPSWLMAVAGDAIRDWTPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLTGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHSQGVLHRDIKGSNLLIDDEGILKIADFGLATFYDPEQKQPMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILGELLTGKPIMPGRTEVEQLHKIFKLCGSPSEDYWKKYKLPNATLFKPQQPYKRCVLETFKDFPTSSLPLIETLLSIDPDDRGTALAALNSEFFTTEPYACEPSSLPKYPPSKELDVKLRDEEARRQKALNGKANVVDGARRVRVRERGRAIPAPEANAEIQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPLNASQKGPVSFGATDASFSSAIYNSKPSGSVGSHAASGPYRGKKTKKADSHVGSSWKLMRAFKPSIHQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0789 557 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Dere14g0789 557 FunFam probable serine/threonine-protein kinase At1g54610 187 428 - -
Dere14g0789 557 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0789 557 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Dere14g0789 557 CDD STKc_CDK9_like 104 388 - -
Dere14g0789 557 MobiDBLite consensus disorder prediction 19 33 - -
Dere14g0789 557 MobiDBLite consensus disorder prediction 1 77 - -
Dere14g0789 557 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Dere14g0789 557 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
Dere14g0789 557 MobiDBLite consensus disorder prediction 40 73 - -
Dere14g0789 557 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0789 557 MobiDBLite consensus disorder prediction 470 490 - -
Dere14g0789 557 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0789 557 SUPERFAMILY Protein kinase-like (PK-like) 97 393 IPR011009 -
Dere14g0789 557 MobiDBLite consensus disorder prediction 511 541 - -
Dere14g0789 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Dere14g0789 557 Gene3D Phosphorylase Kinase; domain 1 90 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0789 Dere-ChrDere14 8201551 8205485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0789 96 422 Core Cell Cycle Gene Families AT5G10270 52.286 2.87e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere14g0789 Pkinase 2.3e-66 CL0016