LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere14g0785	ATGCCTAGTGTTTGTGAGAATTTCCTGGAGTTTGACTTTTCAGATAGAGTGCTAAGATCTATTATGGAGAAGCTACTGCTTGCACCAACTTCTCCATCTGTTGCTAAATTATCTGGATGCAAGATGGATGATGGCCGCCAACATGAAAATAGTAGACAGAAAATGGACTACTACAGAGGAGCACATTCCCTGTGGAGTATGGCTCCCCAACATCAGGTAAAGGAACCAAATGCCCTAGTTATGAATAAGAAAATTATGTCCATTATGGCTGAGAGGGAGGCTGCAATTCGAGAACGAAATGCAGCTTTATCTGAAAAGAACGAAGCTCTGGCTGCTCGAGATGATGCCCTTCGGCAGAGGGATGAAGCACTTATTCAGAGGGATAATGCCTTAATGGAACGGGATAACGCTCTTGCTGCCCTTCGAATGCAGGATAACACTGTCAACTTCTCACTGGGTAGTGGTATTCAACGTGGATCAAAGCGGATGCACCATTCCTCAAATCACTTAGGTCACATGGCTGAAGCTCCTTACAGCGTAAAGGATTTGGCCACAACTAATGCCTTTCCAGTAACTGTTATAGCTTCTGAAGCAGGCAAGTCTTATCAGGCTAAGAGAACGAAGGAGAACAAGGCAGATTCTTCTAAATCATCAAAGCCAGGCAAAGGGAAGAAAGTGAGTGAGGACTTAAATAGGCAAGCTTCTTCTGAAGGGACAAAGATCAAATCTGAGTGGGATAAGCAGGATGTTGGTTTGAATTTAATTACATTTGATGAAAATACCATGCCAGTCCCAGTTTGCACATGTACTGGAGTTCCACGGCAGTGCTACAAATGGGGAAATGGCGGATGGCAGTCATCTTGTTGTACCACCACATTGTCGATGTATCCACTACCGCAACTTCCAAATAAGCGCCATGCCCGAGTTGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTGCTTAGTAGAGTGGCTGCAGAAGGCCGTGATTTATCTATACCATTGGATCTCAAGGACTATTGGGCCAGACATGGAACAAATCGCTATATCACGATCAAGTAG	1068	0.4457	MPSVCENFLEFDFSDRVLRSIMEKLLLAPTSPSVAKLSGCKMDDGRQHENSRQKMDYYRGAHSLWSMAPQHQVKEPNALVMNKKIMSIMAEREAAIRERNAALSEKNEALAARDDALRQRDEALIQRDNALMERDNALAALRMQDNTVNFSLGSGIQRGSKRMHHSSNHLGHMAEAPYSVKDLATTNAFPVTVIASEAGKSYQAKRTKENKADSSKSSKPGKGKKVSEDLNRQASSEGTKIKSEWDKQDVGLNLITFDENTMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVAAEGRDLSIPLDLKDYWARHGTNRYITIK	355

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere14g0785	355	MobiDBLite	consensus disorder prediction	201	242	-	-
	Dere14g0785	355	SMART	GAGA_bind_2	42	355	IPR010409	-
	Dere14g0785	355	Pfam	GAGA binding protein-like family	42	355	IPR010409	-
	Dere14g0785	355	MobiDBLite	consensus disorder prediction	202	231	-	-
	Dere14g0785	355	PANTHER	-	55	355	IPR010409	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere14g0785	Dere-ChrDere14	8190510	8193365	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere14g0785	42	355	BBR or BPC Transcription factor family	AT2G21240	59.177	1.31e-133	381

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	BBR-BPC	Dere14g0785		GAGA_bind	1.4e-99	No_clan