Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0782 ATGGCAGCCTTTTCATTCCAATACCATCCTTTTCTTGTTGACTCACCATTTCTCTCCAATGCTCCCATAAAGATGTCAGCTTTCACTGAGCAAGCTCATGTAAACCCTGCTCCTCCTTCTCAGTTTCACGAGACATCTTTTAATGTCACATATCAGGAAAATAGCTGTGTTGATCAAAGCTCCAAGTTTACCATGAGTGACAATGAGCCTTCTTCTGTGACCAAAAACCAGAGTCCTGAGACCTCTGTTGTAGTAGATAAGCTTGAACCTGGTGAGCAAGTCACTCAGAAAGTGACTCCTATGGAGAAGAAGAGGAGAAGCGGAAAACGGTCTTCCATGAGTTCTCCCCAATCTAAGGAAGCTACAGGAGAGAGAAACAAGAAACAGAAGAAGAGCAATAATGGCGAGGCGAATGAAGGGGATAAGCCAAAAGCAGAGAAGAAGAATCAGAAAAGGAGTCCTGAAGAGCCTCCAACAGGCTACATCCACGTAAGAGCAAGAAGGGGTCAGGCCACGGATAGCCACAGCCTAGCTGAAAGAGTGAGAAGAGAGAAAATAAGTGAGAGGATGAAGATGTTGCAGCGACTTGTGCCAGGCTGTGATAAGGTAACTGGAAAGGCCCTCATGTTGGATGAAATAATCAATTATGTTCAGTCCCTACAAAATCAAGTGGAGTTCTTGTCAATGAAACTTGCTTCCGTGAATCCCATGTTCTATGACTTCACAACGGACCTAGACACCCTCATGGTTAGGCCAGAGAAATCAAATTGCATGGCATCACCGCTACCATCTATGCCGCAATGCTGCCCCAACCAGGCCACAACTTTTGCTGATACAACCACCATTACCACCAACGCTACCACTGGCTTTCCCACTGCCAGTAACTATCTTATGGACAATTCAGCTTCATTTTTTCTTCAAGGACAGAGGTCAAATGCCTTCTCTGAGGATACTGGTAGTCAATTCTTGGACGCAGAAGATCAACGACAAAAGTTTCTTCATCCATATGGGATCAGCAACAGCTTATGTTTCTTTCATTAA 1041 0.4457 MAAFSFQYHPFLVDSPFLSNAPIKMSAFTEQAHVNPAPPSQFHETSFNVTYQENSCVDQSSKFTMSDNEPSSVTKNQSPETSVVVDKLEPGEQVTQKVTPMEKKRRSGKRSSMSSPQSKEATGERNKKQKKSNNGEANEGDKPKAEKKNQKRSPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFTTDLDTLMVRPEKSNCMASPLPSMPQCCPNQATTFADTTTITTNATTGFPTASNYLMDNSASFFLQGQRSNAFSEDTGSQFLDAEDQRQKFLHPYGISNSLCFFH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0782 346 MobiDBLite consensus disorder prediction 60 83 - -
Dere14g0782 346 Pfam Helix-loop-helix DNA-binding domain 174 221 IPR011598 GO:0046983
Dere14g0782 346 MobiDBLite consensus disorder prediction 121 154 - -
Dere14g0782 346 MobiDBLite consensus disorder prediction 60 178 - -
Dere14g0782 346 CDD bHLH_AtBPE_like 160 245 - -
Dere14g0782 346 Gene3D - 167 239 IPR036638 GO:0046983
Dere14g0782 346 FunFam Basic helix-loop-helix transcription factor 167 239 - -
Dere14g0782 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 220 IPR011598 GO:0046983
Dere14g0782 346 SMART finulus 176 226 IPR011598 GO:0046983
Dere14g0782 346 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 46 268 IPR024097 GO:0006355
Dere14g0782 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 237 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0782 Dere-ChrDere14 8152947 8154647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0782 1 271 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 44.291 3.89e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g0782 HLH 2.1e-06 No_clan