Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0742 ATGGACTGGAATCTGAAAGCTGCTTCATGGGATTTGACGGAATTAAATGAAGCAGGCTTACCCAACATAGAAACAGTTGATACTAATGGGTCAAGCAGATTTGGATTTGGATTACTGAACAGAAGTAAAGGGGAATTCGGTTTTGATTTGAAGCTGGGCCACGTTGGAAATTCTGGGGCAGAATCATCTTCAGGGGCTACAGGTGGTGGAGTCTCCAAAACTGCCTCGTACGCTGCTTCGGGACCCTCAAAGAGAGCTCGAGCAATCAACAATGGAACCCAAACGGCGTCGTGCCTCGTGGATGGGTGCAATTCAGATCTTAGTAATTGCAGAGACTATCACAGGCGTCACAAGGTGTGCGAACTCCATTCCAAGACTCCTGTCGTCACCATTGGTGGCCACAAGCAGAGGTTCTGCCAACAGTGTAGCAGGTTCCATTCGCTGGAGGAATTTGACGAAGGAAAGAGAAGCTGCAGGAAGCGATTAGACGGGCACAATCGCCGGAGAAGAAAGCCCCAGCCAGTGCCTCTCACGCCATCTGCTACTTTTTTATCGAATTACCAAGGGAGGCAGTTGTTACCATTGTCAACCAGTTCACATGTGTATCCATCGAGTGGTGTGGTGAGCCCTGGTTGGAATGGGAGAATGCAACAAGTGCATTTGGTTAATAACAAGCAGGAGCTATATCAGGGGTCTTCTGAAACCACAGTAGGCAGCTATAACAAAGAAGGGAATAAGGAGGAAATCACATATTTACCCAGAAACCCAGACCCATCATCATCTCTTGAAGCTTCTGCTTCAGTGTGCCACACACTTCTGAGCACGACGGGCAGGCCTGTATCAGTGGAGGAGTCTCCTCCTTGTGCTCTCTCTCTTCTGTCATCTCCGGTACAGACCCACACCCACACCCACACCCACACGCCTATGTCCCTCGTGCACCCCTTAGGCCTCACCCTCCATGATGATCACACCTTAGACCTCTCCGTGGCCACTACAGTTCTGCTTAACAATCCCACTCACGATTCTCATCCATCACTCTTCAACATAGCTTCTGATGTTTCCCACCCAAGCCAACCCCCTCCATCACTTCCTTTTCATTGGGATTAG 1107 0.495 MDWNLKAASWDLTELNEAGLPNIETVDTNGSSRFGFGLLNRSKGEFGFDLKLGHVGNSGAESSSGATGGGVSKTASYAASGPSKRARAINNGTQTASCLVDGCNSDLSNCRDYHRRHKVCELHSKTPVVTIGGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPVPLTPSATFLSNYQGRQLLPLSTSSHVYPSSGVVSPGWNGRMQQVHLVNNKQELYQGSSETTVGSYNKEGNKEEITYLPRNPDPSSSLEASASVCHTLLSTTGRPVSVEESPPCALSLLSSPVQTHTHTHTHTPMSLVHPLGLTLHDDHTLDLSVATTVLLNNPTHDSHPSLFNIASDVSHPSQPPPSLPFHWD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0742 368 Pfam SBP domain 98 171 IPR004333 GO:0003677
Dere14g0742 368 MobiDBLite consensus disorder prediction 162 181 - -
Dere14g0742 368 Gene3D - 89 159 IPR036893 GO:0003677|GO:0005634
Dere14g0742 368 ProSiteProfiles Zinc finger SBP-type profile. 95 172 IPR004333 GO:0003677
Dere14g0742 368 MobiDBLite consensus disorder prediction 346 368 - -
Dere14g0742 368 FunFam Squamosa promoter-binding-like protein 14 89 159 - -
Dere14g0742 368 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 58 299 IPR044817 GO:0003677
Dere14g0742 368 SUPERFAMILY SBT domain 97 174 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0742 Dere-ChrDere14 7802446 7804147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0742 1 368 SBP-box Gene Family AT5G50670 37.931 3.43e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Dere14g0742 SBP 5.6e-31 No_clan