Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0728 ATGGAGAACAACCAGCAAGCCCAATCCTCCTCATACCCACCTCAACCTGCTGCTCCTCCTCCTTTCCACCACCTTCTCCAACAACAACAACAGCAGCTCCAGATGTTCTGGTCTTACCAGCGACAAGAAATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGAATTAAAAAGATCATGAAGGCCGACGAGGACGTGCGTATGATCTCCGCCGAGGCACCCATTTTGTTCGCCAAGGCCTGTGAGCTTTTCATCCTGGAGCTCACTATACGATCTTGGATCCACGCCGAGGAGAACAAGAGGAGGACCCTCCAGAAGAATGACATAGCCGCTGCCATCACCAGGACCGACATCTTCGATTTCTTGGTCGATATTGTGCCCAGAGATGAGATCAAGGACGAGGCTGGCCTTGGTGGCATTGTGGGCACCACAGCCAGCGGTGTCCCTTACTATTATCCTCCCATGGGCCAACCTGCTGGCCCTCCCGGCGGCATGATCATTGGACAGCCGGCGGTAAATCCCACTGGAGTGTACGTGCAGCCACCGTCGCAGGCATGGCAGTCGGTGTGGCAGACCGCCGCTGAGGATGGATCATACGGCAGCGGCGGGAACAGTGGGCAGGGCAATATTGATGGTCAGAGCTGA 657 0.5571 MENNQQAQSSSYPPQPAAPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGIVGTTASGVPYYYPPMGQPAGPPGGMIIGQPAVNPTGVYVQPPSQAWQSVWQTAAEDGSYGSGGNSGQGNIDGQS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0728 218 Gene3D Histone, subunit A 22 132 IPR009072 GO:0046982
Dere14g0728 218 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 27 153 - -
Dere14g0728 218 MobiDBLite consensus disorder prediction 1 22 - -
Dere14g0728 218 FunFam Nuclear transcription factor Y subunit gamma 23 132 - -
Dere14g0728 218 MobiDBLite consensus disorder prediction 196 218 - -
Dere14g0728 218 SUPERFAMILY Histone-fold 16 126 IPR009072 GO:0046982
Dere14g0728 218 Pfam Core histone H2A/H2B/H3/H4 28 117 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0728 Dere-ChrDere14 7683296 7686437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0728 22 217 CCAAT-HAP5 Transcription Factor Family AT3G48590 86.139 1.50e-107 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dere14g0728 CBFD_NFYB_HMF 3e-17 CL0012