Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0687 ATGAAGAAGGTTACAACAATTGCTTCAGTTTTCTTCATCTTAATAACGATTTCTATTGAAATCGTCCAAGTTACTTCATCGTCGCCTCTCTTACATGAGAACCAGGCTTATGAGGAATCTGCGGGTGGAAGACATAATAAACAGGAACAAGAGCATGCTCATGAAATACATTGCTCTAGAGAAAGAAGTAGGGCAGCTTCAAAAATAATTGAGGAGTATTTGATGCCATTTGTGGAAGGACAAAACTATCAGCTCCCAAGAAAGTGCAGACTTCATCCTGACAATAATATATTCAGGGATCAGGAAGAGCATAAAATTCACATAGATATAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAACATTTTGATAACAGACACTACAATCTTCTAAATGTAACTCATGGTAAGTGCTTGGCTGATTTGTGTGGTGCACTGCATTGTGATGCTGTGATGAATACCAAGACCTCTAAAACCAAGTGTAATCCAGCAGCTGCGGGGAGAAATCGTCACCTATGTGAGAGTCTTGCAGATAGTTGTTTTCCTATGAATGAGGGGCCTTCAGCAAGCCGTCTTCGTGAATTGTTTCTGCACCAATTTTGCGATGCCCACACCTGCTCAGGGAAACAGAAACCCTTCATTAGAGGAGGCAGGTTAGAGCTTAGTTATAATAGCTTGCAATTACATATTAATGAAGCTGATAATTATCCATCCTGTACTTTTTATTTCACTGCAGAAGCAAAGAAGTATGTTCTATTTGGCTGCTGGAACATTGACCTTGGTGCTACTTCCTGTATTTTATCTTTTTGTTTATTTGGTACAAAGAGATATGAAGAGTCGAACTCAAGAGCTTCGGCGCATTACAAAAGTGGGGCGGAAAACAAAGCCATCTTGATTGGTATAGTTCATGTTAGACTGTTGCAATCATTACCTAGGAATGTGATTGGTTGGAACAGGTTGGAAGATGTTCTGCAAGTATTGATGTTAGCTGTACCTCTGAACAGATTCTATTTGCATGTCTGCCAAAATGATGAGAATTCTGATGGGGTGTTACTGTGA 1086 0.395 MKKVTTIASVFFILITISIEIVQVTSSSPLLHENQAYEESAGGRHNKQEQEHAHEIHCSRERSRAASKIIEEYLMPFVEGQNYQLPRKCRLHPDNNIFRDQEEHKIHIDINEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNVTHGKCLADLCGALHCDAVMNTKTSKTKCNPAAAGRNRHLCESLADSCFPMNEGPSASRLRELFLHQFCDAHTCSGKQKPFIRGGRLELSYNSLQLHINEADNYPSCTFYFTAEAKKYVLFGCWNIDLGATSCILSFCLFGTKRYEESNSRASAHYKSGAENKAILIGIVHVRLLQSLPRNVIGWNRLEDVLQVLMLAVPLNRFYLHVCQNDENSDGVLL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0687 361 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Dere14g0687 361 PANTHER ZINC FINGER PROTEIN-RELATED 13 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0687 Dere-ChrDere14 7269275 7273413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0687 34 227 C2H2 Transcription Factor Family AT5G63280 65.306 8.35e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere14g0687 None None None