Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0680 ATGGTTAACACCAGAAATAGCGCTTCCCAAAATGATTCTGCCCCACCCATGGATCCCATCATCCAGCATCTAGCCTCCATCGCTTCCAAACTTGAAGCCCTTGATGTTTTAGCTGGTGAAGTACCAGCCCTCAGAGCCCAGGCCACCAATTTGCATAGAGTAGAGACAAGACATGGATCACGCGATAAAGAGAAGGCTCCTTGGATTGATGAAGATGATCTAATAAAGGGAAGCCATCGAGTTGGGAGTCCTATGATCTCATTTATTGTGCTGAGTTCACTGATTGACCCAGTGGAATGTGTGGAAGAAACAGGGGTTGAAGAGATAGATACAGAAGGTGCTGGTCTTTTATCTCCTTCTGACATAATGATCTGTACTATAGAAAGGAAAGAGAAAAAAAACACAAGAATATCTGAAATGGCAATGAAGGCCAAGAATGAGCAATGGCAAATCCACAGGGCTTGCTGCTCTGATACCATAATTCCTGGAAGAATCAGTGCTGAGCCAAGGAGTTCTCGGCTCAAAGATAAGAGGAAGGGTGAAGGGGAAACGGTAATTAAAGAACTATTTATCCAGGATGTGGTACAAAACAATGATCTGCTTCATGTACTTGGGAAAGGATCTGCTATAGTAATTCTTCCTCGTAGCTCTTCAGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCACAACAACTAAAAGTGAACCCTGGGTTTTCCCTCAGTGCATGCAATTCTGAAGGAATGAACTCCTCAATAGGTTTTGTTTCTGATGACCTGGTTTACAACAGGAAAAATGGAATCAAGCAAGTGAAAGGTTTCTATTCAGTAAAAGAAAAGTTTGCTTCACTATGTCAAAGGAATAGGATTTCCTCGTTAAGGGTAAATGATAACATATGCACTTCAAGTTCTAAGACCCTGGAAAGAGACACTGAAAGAGAAACAAATCAAGGAGATGGCTTGTCAGATCAGAGGCTATTTTCATGTGTCACATGTGGAATGTTAAGCTTTGCCTGTGTTGCTATAGTAAAGCCTAAAGAACCAGCTGCTAGATACTTCATGTCGGCTGATTGTAGCAGCTTTAATGGTTGGGTTGTTGGTTCTGGAGTAACTAGCAATAAATTTACCATTGGCCATGGAGATGCAACTATTTCTATGCAGAACACCTTTACAGGATGGGCGGAAAAGAATGCCCAAAAAGGTTTATATGATATTCCTCTCCACATTGAATACCACACGCAGATTGCACATCAAGATTCCAAGGAGGTTTCAAATACTCAAAGACAAAAGGAAACTACAGCTCTTGGCTTGTTGGCTTCAGCATATGGAAGTTCTTCTGACTCTGAGGAAGACCAAATTGATGCAGATATTGGAGGCGTAGATGGCGAATCAAATGTGACAAACCATGCATCAGGAAGTAGATCTGAAAAGGAGATATCTTGTTCGCCTTATGCGAGTCATCAGACCGTTGACTACTCTGTTGAGATGGAAGATTATAATATCACTTCGGGGTTTGCATTTAAAAGTATGAGGGCAGTTCCTCATTCCTCCTTGAACTGTTCCCCAGATGTTCATGATGCTGAAACTTTGATGTGCAAGGCTGGAGTACCCATTGATAATAAGAGTGTTCCATTTCTACCCCAAACCGACGAAGATTCATCCAGAATGCATGTCTTTTGTCTAGAGCATGCTGCAGAAGTTGAGCAGCAACTGCGCTCAATAGGAGGAGCGCACATATTACTCCTCTGTCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAGTTTGTGGCAGAAGAACTGGGGATTGATTATGCATGGAAGAATATTGAATATAGGCATGCCACTGAAGAGGATGAGGAGAAGATCCAAGCATCTCTGGATAGTGAGGAAGCTATTCCTGGGAATGGAGACTGGGCTGTAAAACTGGGAATCAATCTCTTTTACAGTGCCAATCTTAGCCGCTCTCCTTTGTATAGTAAGCAGATGCCTTACAATTCAGTTATATATTATGCATTTGGCTGCAGCTCTCCGTCAAACTCACCTACAGAGCCCAAGGTTTATCAGAGGAGGGCCAGCAAGCAGAGAAAGGTAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAATCAGGTCCATCCCCTTTTAGCAAAACGAGAGTCTGAAGATGGTGAGGATGAAAAAAGATCATGTGGGTGGTCATCACCTGATGAGAAAATTGAGAGATCAGAAAGTAGCCACAGAAACAATATTACTGGTAGAAAATCTGGTAGAAAAAGAAAAATGACTTTAGAGGGTAGAGGAGCGTGGAAAGCCACTTTTGCTGAGAGAGATGTGGTTTCAGATAATTCATTTGAAGATAAAGCTAACCCACAGCAAAGGAGGATTCTTAGAAGTAAGCAAGCCAGATATATTGAAATAGATGATGCCCTCTCGGAAGAGGATTATTCTCCACGGCAGCATCATAGAAATCATATAAGAAACCAAACAAAATGCATTGAAAATGGTGCAGTTTCAGATGATTTGCTGGATGATAATATTTGCATGCAGCACAGGAGAAATGTTGCAAATGAAGCCAAATTTTTTGACAACGATGAAGTTTCAGATGATACAATGGAATATGATTCTGATTGGCGGCAGAGGGTTGAGTTAAGCAGCAAGCAAATCAAAGATGCAGGGAGAGATGCAATTTCAGAGGATTCAATGGGTGTTTGTTCTCTTCAGCTGCAAAGGAAGACTTTTAAAGGTAAGCAAGCCAAATACATTGCTGAAGAAGATGCAATTTCCAATGGTCAAATGGAGGATCATTTTCAAAAGCAGCAAATGAGGATTTCAAAAAGCAGACAAGCCAAATGTTTTTCTGGGGAAGATTCATTGATGTCTGATGAACTGGAGCATCACACACAGAAGCAGCAACGAAGAATTTCCAAAAGCAGGCAAGCCAACTACCTTGCTGGTGAGGATGCAATATCTAATGACCAACTGGAAGACTGTTCTTACAAGTATAAAAGAAGGATTTCTAAAAGCAAGCGAGCCAAATGCCTAGTAAATGAAGATGTAATGTCTGATGACAACTTAGAGCATCAAGTACAGAAGCAGCAAATGAGTGCTACTAGGAGCAGGCAAAAGAAATGCATTAATAAAGAGGTTATGGATGACTCAACTGAAGATTCTTGTCTGCTGCATAGAACACCTAAATGGAAGCTAGCTAAATGCATGGATGAAGATGACATTAATTCAGATGGTCAACTGGGGGATGATTCTCATCAGCAGCATAGGAGGATTCTTCGAAGTAATCAGTCTAAATCAGAGACACTTCGGCAAATTAAACAAACGAAACCTCGCTGTGTGAAAAACCAGACATTCTGGCCTGTAAAACATAGGGCTCGCCTTCTTATTAATCCAAATGCTACTAAGCAAATGAAGCAGTCTCCTCGCATGCAGAATAATCGATCTGATAATTCCAGAGAGTTTAGTTTACATGTTGAAGAGGAGGAAGAAGGTGGACCAAGCACACGCCTTAGGAAGAGAGCCCCTAAAGTTCAGGAGTCTGAAGCAAAACCAAAAGAAAAGCAAACCAAAAAGAAAAAGGTGAAGCGTGCCACGGGTGGAAAGGCTTCAGCTGGCCATACCGAAGTGAAGGATGAGGAAGCAGATTACCAGTGTGACATTGAGGGGTGCACCATGAGTTTTGGGTCCAAACAGGAGCTTGTGTTGCATAAGAGAAACATCTGTCCAGTAAAGGGGTGTGGAAAGAAGTTTTTCTCACACAAATATCTGGTGCAGCACCGTCGAGTCCACATGGATGACCGCCCCCTGAGGTGTCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCATGGGCACGTACTGAACATATTCGAGTTCACACTGGTGCTCGTCCATATGTTTGTGCTGAGCCTGGCTGTGGGCAAACATTTAGATTTGTGTCTGATTTTAGTCGCCATAAGCGAAAGACTGGCCATTCAACAAAGAAGAGTCGTCAATAG 4014 0.4223 MVNTRNSASQNDSAPPMDPIIQHLASIASKLEALDVLAGEVPALRAQATNLHRVETRHGSRDKEKAPWIDEDDLIKGSHRVGSPMISFIVLSSLIDPVECVEETGVEEIDTEGAGLLSPSDIMICTIERKEKKNTRISEMAMKAKNEQWQIHRACCSDTIIPGRISAEPRSSRLKDKRKGEGETVIKELFIQDVVQNNDLLHVLGKGSAIVILPRSSSDISVCSKLRVGSQQLKVNPGFSLSACNSEGMNSSIGFVSDDLVYNRKNGIKQVKGFYSVKEKFASLCQRNRISSLRVNDNICTSSSKTLERDTERETNQGDGLSDQRLFSCVTCGMLSFACVAIVKPKEPAARYFMSADCSSFNGWVVGSGVTSNKFTIGHGDATISMQNTFTGWAEKNAQKGLYDIPLHIEYHTQIAHQDSKEVSNTQRQKETTALGLLASAYGSSSDSEEDQIDADIGGVDGESNVTNHASGSRSEKEISCSPYASHQTVDYSVEMEDYNITSGFAFKSMRAVPHSSLNCSPDVHDAETLMCKAGVPIDNKSVPFLPQTDEDSSRMHVFCLEHAAEVEQQLRSIGGAHILLLCHPDYPKIEAEAKFVAEELGIDYAWKNIEYRHATEEDEEKIQASLDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGCSSPSNSPTEPKVYQRRASKQRKVVAGKWCGKVWMSNQVHPLLAKRESEDGEDEKRSCGWSSPDEKIERSESSHRNNITGRKSGRKRKMTLEGRGAWKATFAERDVVSDNSFEDKANPQQRRILRSKQARYIEIDDALSEEDYSPRQHHRNHIRNQTKCIENGAVSDDLLDDNICMQHRRNVANEAKFFDNDEVSDDTMEYDSDWRQRVELSSKQIKDAGRDAISEDSMGVCSLQLQRKTFKGKQAKYIAEEDAISNGQMEDHFQKQQMRISKSRQAKCFSGEDSLMSDELEHHTQKQQRRISKSRQANYLAGEDAISNDQLEDCSYKYKRRISKSKRAKCLVNEDVMSDDNLEHQVQKQQMSATRSRQKKCINKEVMDDSTEDSCLLHRTPKWKLAKCMDEDDINSDGQLGDDSHQQHRRILRSNQSKSETLRQIKQTKPRCVKNQTFWPVKHRARLLINPNATKQMKQSPRMQNNRSDNSREFSLHVEEEEEGGPSTRLRKRAPKVQESEAKPKEKQTKKKKVKRATGGKASAGHTEVKDEEADYQCDIEGCTMSFGSKQELVLHKRNICPVKGCGKKFFSHKYLVQHRRVHMDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSRQ 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0680 1337 SMART c2h2final6 1304 1330 IPR013087 -
Dere14g0680 1337 SMART c2h2final6 1274 1298 IPR013087 -
Dere14g0680 1337 SMART c2h2final6 1244 1268 IPR013087 -
Dere14g0680 1337 SMART c2h2final6 1221 1243 IPR013087 -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 1081 1101 - -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 1129 1213 - -
Dere14g0680 1337 ProSiteProfiles Zinc finger C2H2 type domain profile. 1274 1303 IPR013087 -
Dere14g0680 1337 ProSitePatterns Zinc finger C2H2 type domain signature. 1306 1330 IPR013087 -
Dere14g0680 1337 FunFam Probable lysine-specific demethylase ELF6 1301 1330 - -
Dere14g0680 1337 Coils Coil 127 147 - -
Dere14g0680 1337 ProSiteProfiles Zinc finger C2H2 type domain profile. 1244 1273 IPR013087 -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 960 981 - -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 719 752 - -
Dere14g0680 1337 Gene3D Classic Zinc Finger 1271 1294 - -
Dere14g0680 1337 ProSiteProfiles Zinc finger C2H2 type domain profile. 1304 1335 IPR013087 -
Dere14g0680 1337 Gene3D Classic Zinc Finger 1295 1337 - -
Dere14g0680 1337 Gene3D Classic Zinc Finger 1246 1270 - -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 1081 1113 - -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 1157 1192 - -
Dere14g0680 1337 ProSitePatterns Zinc finger C2H2 type domain signature. 1246 1268 IPR013087 -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 464 480 - -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 441 480 - -
Dere14g0680 1337 ProSitePatterns Zinc finger C2H2 type domain signature. 1276 1298 IPR013087 -
Dere14g0680 1337 FunFam Probable lysine-specific demethylase ELF6 1271 1300 - -
Dere14g0680 1337 SUPERFAMILY beta-beta-alpha zinc fingers 1242 1280 IPR036236 -
Dere14g0680 1337 PANTHER ZINC FINGER PROTEIN ZIC AND GLI 1042 1329 - -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 719 765 - -
Dere14g0680 1337 MobiDBLite consensus disorder prediction 1137 1156 - -
Dere14g0680 1337 SUPERFAMILY beta-beta-alpha zinc fingers 1284 1328 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0680 Dere-ChrDere14 7215484 7223560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0680 161 813 C2H2 Transcription Factor Family AT3G48430 43.994 3.47e-156 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere14g0680 None None None