Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0679 ATGGCAGGTTCGGCAGCTCTGGCTTCAGAGCCTAACACAGATGTATTTTCATGGCTGAAATCTCTGCCTCTTGCTCCAGAGTACCGCCCGACTTTGGCTGAGTTCCAAGATCCAATTTCATACATTTTTAAGATCGAGAAGGAGGCCTCCAAGTATGGAATCTGCAAAATCGTGCCCCCCGTGCCGCCTTCTCCGAAGAAGACAGCAATTGCGAATTTCAATCGTTCTTTGGCTACCCGAGCTGCTTCCTCTGACTCTGCTTGTTCGAAATCTCAGCCTACATTCACCACAAGGCAGCAACAGATCGGGTTCTGCCCACGGAAACCACGGCCCGTGCAGCGTCCTGTTTGGCAGAGTGGCGAATACTACACGTTTCAGGAATTCGAAGCGAAGGCCAAGGCTTTTGAGAAGAACTACCTTAAAAAAGGTGCCAAGAAAGGTGGGCTTTCCCCTCTGGAAATAGAAACGCTTTATTGGAAGGCGACAGTGGATAAACCCTTTTCAGTAGAGTATGCAAACGATATGCCTGGTTCGGCTTTTGTTCCCCTGAATGGGAGAAAATGCAGAGAGACAGGGGACAGTGTGACTCTTGGGGAGACTGCATGGAATATGAGGGCTGTGTCAAGGGCAAATGGTTCTTTGTTGAGGTTCATGAAGGAGGAGATTCCTGGTGTTACATCGCCAATGGTGTATGTAGCTATGTTGTTCAGTTGGTTCGCTTGGCACGTAGAGGATCATGACTTGCATAGCTTGAATTACCTGCACATGGGGGCAGGCAAGACGTGGTACGGCGTGCCAAGGGATGCTGCCGTCGCATTTGAGGAAGTGGTCCGAGTTGACGGTTATGGAGGAGAAATAAACCCTCTTGTGACTTTTTCTATTCTTGGTGAGAAAACCACAGTGATGTCACCTGAAGTATTTATTGGTGCAGGGGTCCCATGTTGCAGGTTAGTGCAAAATGCCGGGGAATTTGTTGTCACATTTCCAAGGGCCTACCACACGGGGTTTAGTCATGGATTTAATTGTGGGGAGGCAGCTAACATTGCAACACCTGAGTGGTTGAACATTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATAAACTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCCTAGCTTTGTGTTCTAGGTTTGTCTTACCCATTTTGTGGCTTCTTACTTTTGGCTATTGA 1209 0.4797 MAGSAALASEPNTDVFSWLKSLPLAPEYRPTLAEFQDPISYIFKIEKEASKYGICKIVPPVPPSPKKTAIANFNRSLATRAASSDSACSKSQPTFTTRQQQIGFCPRKPRPVQRPVWQSGEYYTFQEFEAKAKAFEKNYLKKGAKKGGLSPLEIETLYWKATVDKPFSVEYANDMPGSAFVPLNGRKCRETGDSVTLGETAWNMRAVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVDGYGGEINPLVTFSILGEKTTVMSPEVFIGAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLALALCSRFVLPILWLLTFGY 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0679 402 SMART cupin_9 196 365 IPR003347 -
Dere14g0679 402 Pfam jmjN domain 26 59 IPR003349 -
Dere14g0679 402 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 389 - -
Dere14g0679 402 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Dere14g0679 402 ProSiteProfiles JmjC domain profile. 199 365 IPR003347 -
Dere14g0679 402 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Dere14g0679 402 FunFam Probable lysine-specific demethylase ELF6 18 369 - -
Dere14g0679 402 SUPERFAMILY Clavaminate synthase-like 211 381 - -
Dere14g0679 402 Gene3D Cupin 18 369 - -
Dere14g0679 402 SMART JmjN_1 24 65 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0679 Dere-ChrDere14 7210786 7213887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0679 197 395 C2H2 Transcription Factor Family AT5G04240 62.814 8.59e-90 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dere14g0679 JmjC 9.7e-36 CL0029