Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0628 ATGGAATCCAAACCAAGAAGACAAGAAAGAACCACTATCAAGTTCCTCTGTAGCTACGGCGGGAAGATTCTTCCTCGTGTCACCGACGGGAAGCTACGCTACGTCGGCGGCCATACTAGAGTCCTCGCCGTTGATCCTTCTTTTTCTTTTTCAGAGCTGATGGTGAAGCTTGGAGAGTTCTGTGGTTCGTCTGTGACGTTGAGATGTCCATTGCCGAACGGTGACTTGGACACCTTGATTTCGATTACCAGCGATGAAGATTTGGCGCATATAATCGATGAATACGACAGAGCTTCTTCGTCGTTAACTCATCCGCTGAAGATTAGAGCCATTCTTTCGCCGCCGAAGTCACTCAAGAAAGTATCTGCTTCTTCGTCTTCTGCATCCAGCGCCAATCAATCTCCGTCCAGATCTCCTCGCACCTCCACCGAGTCCTTGCTTTATTCGGTGGCCAAGCGCTATATCTGTCATAACTGCTCGCCGGCGGTTGGATATCCAATCGGGCTCCGTAACGGGAACCCTAGGTTTTTCTACGGTGGACCTTGCTGCAGCAATTACTGCCACTGA 567 0.5009 MESKPRRQERTTIKFLCSYGGKILPRVTDGKLRYVGGHTRVLAVDPSFSFSELMVKLGEFCGSSVTLRCPLPNGDLDTLISITSDEDLAHIIDEYDRASSSLTHPLKIRAILSPPKSLKKVSASSSSASSANQSPSRSPRTSTESLLYSVAKRYICHNCSPAVGYPIGLRNGNPRFFYGGPCCSNYCH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0628 188 MobiDBLite consensus disorder prediction 122 142 - -
Dere14g0628 188 Pfam PB1 domain 29 100 IPR000270 GO:0005515
Dere14g0628 188 Gene3D - 31 112 - -
Dere14g0628 188 SMART PB1_new 27 115 IPR000270 GO:0005515
Dere14g0628 188 CDD PB1_UP2 16 112 - -
Dere14g0628 188 PANTHER OS05G0427100 PROTEIN-RELATED 8 133 - -
Dere14g0628 188 SUPERFAMILY CAD & PB1 domains 29 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0628 Dere-ChrDere14 6643910 6644568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0628 14 94 MAP Kinase Kinase Kinase AT2G35050 50.617 1.33e-23 95.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0711 03 11414989 11415815 Dere14g0628 14 6643910 6644568 CCT
Dere14g0628 14 6643910 6644568 Dere14g0628 14 6643910 6644568 ECH