Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0625 ATGGCTAACTCGGAAGAGGAGAGGACCCTCCAAGATGAACTTTCTCTTCCGATTTTGTTAGCAGACCGAGTCATCAAAAGCACCCAAGAGGCAGAATCCTCCAAGCAAGATTGTTCTGAACTCGCCAAGCAAGTGGAGCTTCTCTCCAACATGCTCCGAACCACCGTGCGCCTCGCCATCACAACACAGTCCCTCTACGAGCGACCCATTCGCCGTATAGTCGCCGATGTCTTCAAGAACCTCGAACGAGCCCTTGCCCTCGTCCGTAAGTGTAGGAAACACAGTGGGGTCCTCCGTCAAGTATTCTCCATCACCACTACCGCTGATTTCCGTAAGGTTTCGAACCTTCTCGAATCTTCTATCGGTGACATGAAGTGGCTTTTTAGTACCTTCGATTCCGACGTTACCAATCTCTCCCTCCCTCCAATAGCTAGCAACGACCCAATTCTCGCTTGGGTCTGGTCGTACACCTCCATTATCACCATGGGTCAGCTCAAGGACCGAGCCGAAGGCGCCAACGAGCTTGCCACTATAGCCAAAGACAATGATCGCAACAAGATTATAATTATGGAAGAAGGTGGGATTCCGCCGTTGCTCAAGTTACTAAAGGAAGCTGCTTCCCCGGATGCGCAACTTGCTGCTGCAAATGCTTTAGTTAACCTTGCTACTGACCAAGAAAGGGTGGTTAGGTTCATCGTGGAATCGCTTGGGATTCCCATAATTGTGCAGGTTCTCCGTGATTCACCGCTGAGGGTTAAGATTTCTGCGGCGAGTTTAATGTCAAAAATGGCCGAGCAGGACCCGATTGCTCAGGAGGAGTTTGTGAGGGCAAATGTGACTCGACCACTCGTATCCTTATTGTCCATGGATACTGTTATGGGTGAACCCGTGCTTCAGGCGGGTCGGCCCAGTATCCATTCACTGGTTGTGAATTTGTCTTCATCAGGTCATTCTTCCTTCACTGCGAATTCTGATGGAAGTAGCCGAGGTGGGCACTATAGAAAGGAAAAGGAGGAGGAAAATCCGGAGATAAAGAAGATCAAGATAGCTTGTGCTGAGGCCTTGTGGAAACTCTCCAAAGGGAGTCTTTCAACCTTTAGGAAACTCACAGAGACCAAAGGTTTGCTTTGTTTAGCTAAAATTATTGAAACGGAGAGAGATAAATTGCAGCTTAATTGCTTTATGGCAGTCATGGAGATTGCTGCAGTTGCAGAATCCAATCCTGATCTTAGAAGAGTGGCCTTTAAGCCCACAGCTCTAGCAGCAAAAGCTGTTCTGGACCAACTTCTGCGAGTGATTCGGGAAGAGATTGATCCTTTGCAAATTCCAGCAATTAAATCAATTGGGTCATTGGCTAGAAACTTCCCTGGAAAAGTGCCACAAGTTCTTGGTCCATTAGTTGCACAACTTGGTAATAGAAACGTAGATGTGGCAATGGAAGCTGCTATTGCCTTGGGTAAATTTGCGTGCTTAGAAAACTACAATTGTATCGACCATTCCAAGGCAATAATAGAGTTTGATGGAGTTCCTAAGCTAATGAAGCTTCTGCAAAATAACGATCCTGCCCAAATGCATTGCCTGAAACTACTGTGTTACCTTTCCTTGCATGTTGGCAATAGTAAGGCTCTTGAGCAAGCACAGGCTTTGAGTACTCTCGAGCGGGTAGCTCGTTCTGTTGCATCTCAACATCCTGATATGAAGGAACTGTTTGCTAAGGTCATACACCACCTGACTCTTTATCAGACAGGAGGTCAATTGCACAGACAACCTTATGGGCAATAA 1782 0.4697 MANSEEERTLQDELSLPILLADRVIKSTQEAESSKQDCSELAKQVELLSNMLRTTVRLAITTQSLYERPIRRIVADVFKNLERALALVRKCRKHSGVLRQVFSITTTADFRKVSNLLESSIGDMKWLFSTFDSDVTNLSLPPIASNDPILAWVWSYTSIITMGQLKDRAEGANELATIAKDNDRNKIIIMEEGGIPPLLKLLKEAASPDAQLAAANALVNLATDQERVVRFIVESLGIPIIVQVLRDSPLRVKISAASLMSKMAEQDPIAQEEFVRANVTRPLVSLLSMDTVMGEPVLQAGRPSIHSLVVNLSSSGHSSFTANSDGSSRGGHYRKEKEEENPEIKKIKIACAEALWKLSKGSLSTFRKLTETKGLLCLAKIIETERDKLQLNCFMAVMEIAAVAESNPDLRRVAFKPTALAAKAVLDQLLRVIREEIDPLQIPAIKSIGSLARNFPGKVPQVLGPLVAQLGNRNVDVAMEAAIALGKFACLENYNCIDHSKAIIEFDGVPKLMKLLQNNDPAQMHCLKLLCYLSLHVGNSKALEQAQALSTLERVARSVASQHPDMKELFAKVIHHLTLYQTGGQLHRQPYGQ 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0625 593 Gene3D - 12 128 IPR036537 GO:0007166
Dere14g0625 593 MobiDBLite consensus disorder prediction 316 339 - -
Dere14g0625 593 Pfam Armadillo/beta-catenin-like repeat 182 222 IPR000225 GO:0005515
Dere14g0625 593 SMART arm_5 496 535 IPR000225 GO:0005515
Dere14g0625 593 SMART arm_5 224 265 IPR000225 GO:0005515
Dere14g0625 593 SMART arm_5 181 223 IPR000225 GO:0005515
Dere14g0625 593 SMART arm_5 267 360 IPR000225 GO:0005515
Dere14g0625 593 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 193 226 IPR000225 GO:0005515
Dere14g0625 593 PANTHER ARMADILLO REPEAT ONLY 4 9 582 - -
Dere14g0625 593 SUPERFAMILY ARM repeat 166 577 IPR016024 -
Dere14g0625 593 Gene3D - 161 318 IPR011989 -
Dere14g0625 593 Gene3D - 333 589 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0625 Dere-ChrDere14 6565256 6567037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0625 160 295 U-box Gene Family AT2G28830 29.412 2.14e-08 55.1