Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0612 ATGCCTGTATATCCATGGAGCCTCTTCTTCCTCTGCTTTTCTCTTTCACTCCTTCACCATTCTTTTATAGCTTTTGCAGTAAACCAGCAAGGCCAAGCTCTTCTTTCATGGAAGAGAACCCTGAAGGGATCCCTGGAGGTGTTGAGTAATTGGAATCCTAATGACAATACACCATGTGGCTGGTTTGGAGTTAGCTGTAACTCCAAGAACGAGGTTGTGAAATTAGATCTGAGGTATGTGGATTTAGTAGGAACACTTCCTTCCAATTTCACTTCATTGCTTTCCCTGAACAAGCTGATCCTAACGGGAACGAACCTCACTGGTTCAATCCCAAAAGAAATTGGCACTCTTGGCGAGCTCGACTACTTGGAATTGAGTGACAATGCCTTGACTGGTGAAATCCCAAGTGAGCTTTGCTTCTTGCCAAAGCTTGAGCAGCTCCATCTAAACTCAAACCAGCTTGTGGGTTCGATTCCAAATGCAATCGGGAACCTCACAGAGTTGGTGTGGCTGGTCTTATATGACAATCAACTAAGCGGTGAAATTCCCAGAACCATTGGCAACCTGAGGAACCTGCAAGTGATCAGAGCTGGAGGAAACAAGAACCTTCAAGGCTCTCTGCCACAAGAAATAGGCAACTGTACCAATTTGGTCATGTTGGGTCTGGCTGAAACAAGTATCACAGGTTTTCTTCCTCCAACTCTTGGCCTTCTTAAGAAGCTTGACACTCTTGCGATTTACACTACTCTCCTCTCTGGTCAAATCCCTCCTGAACTCGGTGATTGCACTGAGCTTCAGAATATTTATCTGTACGAAAACTCACTCACAGGATCCATACCAAGTAGATTGGGACAGCTTAGGAACCTCAAAAATCTTCTACTATGGCAGAACAGTCTAGTTGGCACCATCCCACCAGAGATTGGAAATTGCCACCAGTTATCTGTCGTTGACATTTCGATGAACTCACTTACCGGAAGCATTCCCAAAAGTTTTGGAAATTTGACGTTGCTAGAAGAACTTCAACTTAGCGTCAATCAGATTGCGGGGCAGATTCCAGAAGAACTGGGAAACTGTCAGCTACTCACTCATGTTGAGCTGGACAACAATCAAATCACGGGTACGATACCTTCTGAATTTGGGAACCTTAGGAATCTAACTCTGTTGTTTTTATGGCATAACAAGCTCGAAGGATCTATACCATCTTCCCTTTCGAGTTGTCAAAATCTGGAAGCAGTGGATCTGTCGCAGAATGGATTGACGGGTTCCATACCAAAGGGGATATTCCTGCTCAAGAATCTGAACAAGCTTTTACTACTCTCTAACAGTCTCTCCGGGAATATACCCGCCGAGATTGGGAACTGTACGTCTCTGATTCGGTTCCGAGCGAGCAACAATAAGATCACAGGGAACATTCCACCACAGATTGGGAACCTGAGGAACTTGAATTTCTTGGATCTTGGAAGCAACCGGATTTCCGGAGTTATTCCAGAAGAGATCTCAGGCAGCCGGAATCTCACGTTTCTGGACCTACATTCTAACTTAATTGGCGGAAACTTGCCCGAAAGTCTCAGCCAGCTAATCTCGCTACAATTTATTGATGTCTCCGATAACATGATCGAAGGTACCCTAAGGCCGAGCCTTGGATTGCTTGGTTCACTCACAAAACTCGTTCTCGGAAAAAATCACATCTCCGGGTCAATTCCGAGTGAACTTGGTTCTTGTGCAAAGCTGCAGTTATTAGACCTCAGTAGCAATGAGCTCTCAGGTAAAATCCCAGGTAGTCTGGGTAACATTCCGGCGCTCGAAATCGCACTGAATCTGAGCTGGAATAAACTCTCCGGCGATATCCCTCAGGAGTTTTCTGCATTGAGCAAACTCGGAATGTTAGACATATCGCACAACGAGCTCACCGGTAGCCTTCAGTACCTCGAGGACCTCCAAAATCTCGTGGTCCTCAATATCTCATATAACAAATTCTCGGGTCGCGTTCCGGACAAGCCTTTCTTCTCAAAGCTCCCTCTCAGCGTCCTCGAGGGAAACCCGTCGCTCTGCATCTCCGACAACCAATGCGCCGAAGACGATTCCAAACGATCAATTCGACGGACAAAGGCGGCGCGTATAGCCATGGTGGTCCTCTTGTGTACCGCGTGTGCGCTTTTCATCGCAGCGCTTTACGTCGTTGTTGCGGCAACGAGACGTAGGTTTCCGGAGAACGGCCTAGACCTCGACGGAAAGGAAAGCGACGCGGAGATGGGCCCACCTTGGGAGGTGACATTGTATCAGAAGCTCGACTTGTCAATCTCTGACGTGGCGAGATGCCTGACAGCTGGCAACGTCGTTGGGCGCGGACGATCCGGCGTCGTTTACAGGGTGAATCTCCCGTCGGGATTAACCATCGCCGTGAAAAGGTACAGATTATCGGAGAAATTCTCAGCTTCTGCATTCTCGTCGGAGATTGCCACGCTGGCGAGAATCCGGCACCGGAATATCGTGCGGCTACTGGGTTGGGCGGCGAACCGGAAAACGAAATTACTGTTGTATGATTATTTACCGAATGGTAATTTGGATGCGCTCTTACACGAGGGGTGCACAGGATTAATCGAGTGGCAGACCCGGTTCAAGATAGCACTAGGCTTGGCTGAAGGCTTGGCTTACTTACACCATGACTGCGTACCTGCTATCTTGCACCGGGACGTGAAGGCGCTTAACATTTTGTTAGGAGACAGATACGAAGCATGTTTGGCAGATTTTGGATTCGCTAGATTGGTGGAAGATCACGGTCCGTTTTCCGTTAATCCACAGTTCGCGGGCTCTTACGGCTACATTGCGCCGGAGTATGGATGCATGGGGAGAATCACAGAGAAGAGCGATGTGTACAGCTTCGGAGTGGTGCTGCTAGAGATAATAACGGGAAAAAGACCCGTGGACGCATCATTCGCGGAGGAGGGGCAGCACGTGATCGAGTGGGTGAGGGAGAAGCTAAAGAAGAAGGAGGACCCAATAGAGATTGTGGATTCCAAGCTTCAAGGACATCCAGACGCGCAAATACAAGATATGCTTCAAGCGCTTGGGATCGCTCTCTTGTGCACTAGTCATCGCGCAGAGGATCGCCCCACTATGAAGGATGTGGCCGCATTATTGAGAGAGATCAGGCACGATGCTTCGCTTCCTGAGCCCCACAAGCCCACCACTACTAGTACAACTACTACCAATTCCATGAAAACGACGTCGCAGGCCTCGTCGTATTCGTCGTCCTTGTCGGTTACTCCGGCTCAGTTATTGCTGCTTCACCCCTCGTCTCATTCCTCCTCGCTTGCTTATTCTTCTTCTTCGGTAGCCGCTTACCAACCAACTGGAGGGAATCAATAG 3369 0.4847 MPVYPWSLFFLCFSLSLLHHSFIAFAVNQQGQALLSWKRTLKGSLEVLSNWNPNDNTPCGWFGVSCNSKNEVVKLDLRYVDLVGTLPSNFTSLLSLNKLILTGTNLTGSIPKEIGTLGELDYLELSDNALTGEIPSELCFLPKLEQLHLNSNQLVGSIPNAIGNLTELVWLVLYDNQLSGEIPRTIGNLRNLQVIRAGGNKNLQGSLPQEIGNCTNLVMLGLAETSITGFLPPTLGLLKKLDTLAIYTTLLSGQIPPELGDCTELQNIYLYENSLTGSIPSRLGQLRNLKNLLLWQNSLVGTIPPEIGNCHQLSVVDISMNSLTGSIPKSFGNLTLLEELQLSVNQIAGQIPEELGNCQLLTHVELDNNQITGTIPSEFGNLRNLTLLFLWHNKLEGSIPSSLSSCQNLEAVDLSQNGLTGSIPKGIFLLKNLNKLLLLSNSLSGNIPAEIGNCTSLIRFRASNNKITGNIPPQIGNLRNLNFLDLGSNRISGVIPEEISGSRNLTFLDLHSNLIGGNLPESLSQLISLQFIDVSDNMIEGTLRPSLGLLGSLTKLVLGKNHISGSIPSELGSCAKLQLLDLSSNELSGKIPGSLGNIPALEIALNLSWNKLSGDIPQEFSALSKLGMLDISHNELTGSLQYLEDLQNLVVLNISYNKFSGRVPDKPFFSKLPLSVLEGNPSLCISDNQCAEDDSKRSIRRTKAARIAMVVLLCTACALFIAALYVVVAATRRRFPENGLDLDGKESDAEMGPPWEVTLYQKLDLSISDVARCLTAGNVVGRGRSGVVYRVNLPSGLTIAVKRYRLSEKFSASAFSSEIATLARIRHRNIVRLLGWAANRKTKLLLYDYLPNGNLDALLHEGCTGLIEWQTRFKIALGLAEGLAYLHHDCVPAILHRDVKALNILLGDRYEACLADFGFARLVEDHGPFSVNPQFAGSYGYIAPEYGCMGRITEKSDVYSFGVVLLEIITGKRPVDASFAEEGQHVIEWVREKLKKKEDPIEIVDSKLQGHPDAQIQDMLQALGIALLCTSHRAEDRPTMKDVAALLREIRHDASLPEPHKPTTTSTTTTNSMKTTSQASSYSSSLSVTPAQLLLLHPSSHSSSLAYSSSSVAAYQPTGGNQ 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0612 1122 MobiDBLite consensus disorder prediction 1102 1122 - -
Dere14g0612 1122 Gene3D Ribonuclease Inhibitor 283 362 IPR032675 -
Dere14g0612 1122 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 27 200 - -
Dere14g0612 1122 MobiDBLite consensus disorder prediction 1051 1083 - -
Dere14g0612 1122 ProSiteProfiles Protein kinase domain profile. 774 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0612 1122 Gene3D Phosphorylase Kinase; domain 1 759 849 - -
Dere14g0612 1122 Gene3D Transferase(Phosphotransferase) domain 1 850 1071 - -
Dere14g0612 1122 Pfam Protein kinase domain 777 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0612 1122 SMART LRR_sd22_2 382 411 - -
Dere14g0612 1122 SMART LRR_sd22_2 165 191 - -
Dere14g0612 1122 SMART LRR_sd22_2 623 648 - -
Dere14g0612 1122 SMART LRR_sd22_2 502 521 - -
Dere14g0612 1122 SMART LRR_sd22_2 478 501 - -
Dere14g0612 1122 SUPERFAMILY L domain-like 27 297 - -
Dere14g0612 1122 Gene3D Ribonuclease Inhibitor 604 679 IPR032675 -
Dere14g0612 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 894 906 IPR008271 GO:0004672|GO:0006468
Dere14g0612 1122 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
Dere14g0612 1122 ProSitePatterns Protein kinases ATP-binding region signature. 780 802 IPR017441 GO:0005524
Dere14g0612 1122 FunFam Putative LRR receptor-like serine/threonine-protein kinase 605 689 - -
Dere14g0612 1122 SUPERFAMILY RNI-like 267 640 - -
Dere14g0612 1122 FunFam Leucine-rich repeat receptor protein kinase EMS1 520 604 - -
Dere14g0612 1122 SUPERFAMILY Protein kinase-like (PK-like) 773 1087 IPR011009 -
Dere14g0612 1122 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 850 1064 - -
Dere14g0612 1122 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 351 1042 - -
Dere14g0612 1122 Gene3D Ribonuclease Inhibitor 363 603 IPR032675 -
Dere14g0612 1122 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Dere14g0612 1122 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 425 519 - -
Dere14g0612 1122 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Dere14g0612 1122 Pfam Leucine rich repeat 463 515 IPR001611 GO:0005515
Dere14g0612 1122 Pfam Leucine rich repeat 287 347 IPR001611 GO:0005515
Dere14g0612 1122 Pfam Leucine rich repeat 361 419 IPR001611 GO:0005515
Dere14g0612 1122 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Dere14g0612 1122 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Dere14g0612 1122 SMART serkin_6 774 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0612 1122 SMART LRR_typ_2 623 646 IPR003591 -
Dere14g0612 1122 SMART LRR_typ_2 550 574 IPR003591 -
Dere14g0612 1122 SMART LRR_typ_2 141 164 IPR003591 -
Dere14g0612 1122 SMART LRR_typ_2 334 358 IPR003591 -
Dere14g0612 1122 SMART LRR_typ_2 286 310 IPR003591 -
Dere14g0612 1122 SMART LRR_typ_2 165 189 IPR003591 -
Dere14g0612 1122 SMART LRR_typ_2 478 502 IPR003591 -
Dere14g0612 1122 SMART LRR_typ_2 382 406 IPR003591 -
Dere14g0612 1122 MobiDBLite consensus disorder prediction 1059 1083 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0612 Dere-ChrDere14 6409771 6414065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0612 25 1052 Receptor kinase-like Gene Family AT5G56040 54.528 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere14g0612 Pkinase 3e-39 CL0016