Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0582 ATGGGTTTTTCTTCTCTGCACGTCTGCATGGAATCATCGGACCACTGGCTCCAGGGCACAATTCACGAGGAATCTGGACTGGATTCATCTTCACCATCAGGGGACATGCTTACATGCTCAAGGCCCCTGATAGAGAGGAGGCTAAGACCCCCACACGACCAAGCCCTCAAGTGCCCTAGGTGTGACTCCACGCACACCAAGTTCTGCTACTACAACAATTACAGCCTGTCTCAGCCAAGGTACTTCTGCAAGACTTGCAGAAGGTACTGGACCAAAGGTGGCACTCTCAGGAACATCCCCGTTGGTGGTGGTTGCAGAAAGAACAAGAAAGTCTCTAACAAGAAATCCAACGACCCGTCACTTAATAATAATCAAAACCAACCATTACCGCCAGCTGGAATACCCACCTCCTATCACCACCACAACAACCCCAAGGACCATCTTCAACTTTCATTCCCAGCTGATGTGCAATTTTCTCACATCGGTAATTTACTGGGAAACCCTAATTTCATGCTGGAGAACACTAGGTCAATTGATTTCATGGAAAGTAAGTTGGAAGGTTTAATTGGGAGTACTTCTAGGAACTTCAACTTCATGGGAAACAGTGACATGGGTATGGGAATTGGGGTTGGAGACATGAGTGGTCATCTGCCACCAAATTTTCACAATCTTTGCTCTCCTTCAGGATTTGGAGGTATGTCATCTGTTGATGGTAATAATAGTGGCAGTGGGACTTATAATATAATGGACTCTTGCCAGAGACTGATGCTGCCATATGATCATGCCAATGAGGACCAAAATGCCACAATTGATGTGAAGCCAAACCCTAAGCTTTTGTCCCTTGAATGGCAGGACCAGGTTTGTTCTGATGCTGGAAAAGAGTCGTTTGGGTATCTCAACGGTCTAGGATCATGGAGCGGCATGATCAACGGCTACGGTTCGTCCACTACAAACCCTTTGGTCTAG 966 0.4669 MGFSSLHVCMESSDHWLQGTIHEESGLDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSNKKSNDPSLNNNQNQPLPPAGIPTSYHHHNNPKDHLQLSFPADVQFSHIGNLLGNPNFMLENTRSIDFMESKLEGLIGSTSRNFNFMGNSDMGMGIGVGDMSGHLPPNFHNLCSPSGFGGMSSVDGNNSGSGTYNIMDSCQRLMLPYDHANEDQNATIDVKPNPKLLSLEWQDQVCSDAGKESFGYLNGLGSWSGMINGYGSSTTNPLV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0582 321 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Dere14g0582 321 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Dere14g0582 321 MobiDBLite consensus disorder prediction 101 146 - -
Dere14g0582 321 MobiDBLite consensus disorder prediction 115 132 - -
Dere14g0582 321 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Dere14g0582 321 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 45 191 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0582 Dere-ChrDere14 6111492 6112901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0582 1 321 C2C2-Dof Transcription Factor Family AT5G62940 41.299 3.53e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere14g0582 zf-Dof 1.7e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0783 03 12359366 12360472 Dere14g0582 14 6111492 6112901 CCT