Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0566 ATGGAAGGTGGTGGACATGAATATAAGAAGGGGCTGTGGAATTCCGAGGAAGACAAAATTTTGATGGATTACGTGAAGGAGCATGGAGTAGGGAAGTGGAATCGTATAGCTAAACTTACAGGATTGAAGAGATGTGGCAAAAGTTGCAGACTGAGGTGGATGAATTATCTGAGTCCAAACGTGAAGCGTGGAGATTTCTCAGAAGAAGAAGACGACCTTATTATTCGCCTCCACAATCTCCTTGGAAATAGGTGGTCCCTGATAGCAGGGAGAGTGCCGGGGAGGACAGACAACCAAGTGAAGAATTATTGGAACACTCATTTGAGCAAGAAGCTGGGTGTTAAGAAGAAGGGAAAGACCAAAGTGTCTCAATCTCCTAGGCCACTCCCTGCTGAACCAAACGACATTACTTTCAGTACCCCATCAAATCCCTCCAAGGAACCTTCAAATTGTATTGAAAATGGTGAAATTGAAACGTTTGTTCCAGGTTGCTCTTTGAGTACAGTGGATTTCACAAGCATGCAGGAGGTTATTATGAGCGATAATGATCATGACAACACCTTCTGGTTTGCTAACAATGGACTTGGCCTTTTTCCCTCTTCCTTCACAGAGCCTTACCTTCATGACTACTTTGTTGACCTTGATTGGGCTGCCTTGTTTGCGTGGAGAGGGAGAGATCCCAATAACGTGAAGGAAAAGATGCTAAAGAGCAAGAACAAGAAGAAAGATCCAAGGTGA 738 0.4404 MEGGGHEYKKGLWNSEEDKILMDYVKEHGVGKWNRIAKLTGLKRCGKSCRLRWMNYLSPNVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHLSKKLGVKKKGKTKVSQSPRPLPAEPNDITFSTPSNPSKEPSNCIENGEIETFVPGCSLSTVDFTSMQEVIMSDNDHDNTFWFANNGLGLFPSSFTEPYLHDYFVDLDWAALFAWRGRDPNNVKEKMLKSKNKKKDPR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0566 245 CDD SANT 66 107 IPR001005 -
Dere14g0566 245 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Dere14g0566 245 MobiDBLite consensus disorder prediction 115 149 - -
Dere14g0566 245 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Dere14g0566 245 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Dere14g0566 245 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Dere14g0566 245 SMART sant 62 110 IPR001005 -
Dere14g0566 245 SMART sant 9 59 IPR001005 -
Dere14g0566 245 Gene3D - 65 128 - -
Dere14g0566 245 CDD SANT 13 57 IPR001005 -
Dere14g0566 245 FunFam MYB-related transcription factor 9 62 - -
Dere14g0566 245 FunFam Transcription factor WER 64 129 - -
Dere14g0566 245 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Dere14g0566 245 MobiDBLite consensus disorder prediction 135 149 - -
Dere14g0566 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 57 IPR017930 -
Dere14g0566 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Dere14g0566 245 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 131 - -
Dere14g0566 245 Gene3D - 10 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0566 Dere-ChrDere14 5769250 5776772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0566 2 149 MYB Transcription Factor Family AT5G40330 66.892 5.23e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere14g0566 Myb_DNA-binding 5.6e-16 CL0123