Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0556 ATGATGATGATGGAGATTATCATTTCTCTGATTCTGCTCTTTTTGGGTATAGCTGTTTTGGTGTTGATCCATGTCTGCATCGTGGGGAGGGCTTTCGGGAGGGGACATCAGGGAGGAGATGAAGAACAGAGTGGTGATAGAACTGGGACGATGAGAATGTCGCGTGAGGAGTTGAAAAAGCTTCCTTGCTTTGAGTATCAGGAAGCAGAGAAAGGAGGGGTTAGCACTGTGGATTGTGCTGTCTGCCTTGAGAGCTTCGAGGCTGGTGATTTGTGCAGGTTTTTGCCTAATTGCGGCCATAGTTTCCATGTTCCCTGCATAGACTCGTGGATTCTCAAGACACCCATTTGTCCAATTTGTAGAACCTGGGTTCATTTGCCAATGATTCCGACGGTTCTTGGCCAACAAAGTTGA 414 0.471 MMMMEIIISLILLFLGIAVLVLIHVCIVGRAFGRGHQGGDEEQSGDRTGTMRMSREELKKLPCFEYQEAEKGGVSTVDCAVCLESFEAGDLCRFLPNCGHSFHVPCIDSWILKTPICPICRTWVHLPMIPTVLGQQS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0556 137 SMART ring_2 79 120 IPR001841 -
Dere14g0556 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 126 IPR013083 -
Dere14g0556 137 FunFam RING-H2 finger protein ATL2K 53 127 - -
Dere14g0556 137 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 2 125 - -
Dere14g0556 137 ProSiteProfiles Zinc finger RING-type profile. 79 121 IPR001841 -
Dere14g0556 137 SUPERFAMILY RING/U-box 62 127 - -
Dere14g0556 137 Pfam Ring finger domain 78 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0556 Dere-ChrDere14 5689808 5690221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0556 53 126 C3H Transcription Factor Family AT2G18670 45.946 3.34e-19 77.4