Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0552 ATGGCTGCTCGACGGCTTTCCTCTCTGCTTTCTCGCTCTCTATCTACTTCTCTGCTTCACTCACCAGGAAGAATCTATGGCAGGTGGAAGAATATTAACAGATTTAGCACCGCGGCAGCAGCTGAGGAATTAATTACTCCCCATGTTCAAATAAGTTACACACAGCATCTAATAAATGGCCAATCTGTAGATGCTGCATCAGGGAAAACTTTTCCAGCATATGATCCGCGCACGGGCGAGGTGATTGCTCATGTTGCTGAAGGCGATGCTGAAGATATCAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTCGATGAAGGACCTTGGCCAAAAATGACTGCTTATGAAAGATGTCGGATTTTGCTGCGATTTGCTGATTTGGTTGAGAAGCACAGCACTGAGCTTGCTGCTTTGGAGACATGGAACAGTGGGAAGCCTTATGAACAGTCAGCAAAGTCTGAACTACCATTGTTTGTGCGTCTATTTCACTACTATGCTGGTTGGGCAGATAAAATCCATGGTCTGACAGTCCCTGCAGATGGAGATTACCATGTGCAGGTACTGCATGAACCAATTGGGGTTGCAGGACAGATCATACCTTGGAACTTTCCTCTTATTATGTTTGCCTGGAAAGTTGGACCGGCTCTAGCTTGTGGTAATACCATTGTCCTCAAGACTGCGGAGCAAACTCCGCTAACTGCTCTCTATGTGGCAAAACTATTGCACGAGGCTGGTCTTCCTCCAGGTGTTTTGAATGTGGTTTCAGGGTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTGGACAAGCTAGCTTTCACTGGATCAACCAAGACTGGAAAAATTGTGCTTGAATTGGCTGCAAGAAGCAACCTTAAGCCAGTGACATTGGAGCTCGGAGGAAAATCACCTTTCATAGTATGTGAGGATGCCGATGTTAACAAGGCTGTTGAACTTGCCCACTTTGCTCTGTTTTTCAATCAGGGGCAATGTTGCTGTGCTGGGTCTCGCACCTTTGTACACGAGCGAATCTATGATGAGTTCTTGGAGAAAGCAAAGGCACGTGCTTTGAGGCGTATTGTTGGTGATCCCTTTAAGAAAGGTGTTGAACAAGGTCCTCAGATTGACCAGGAGCAGTTTGCGAAAGTCCTTAGGTACATAAGATCTGGAATTGAAAGCAATGCGACCCTTGAATGTGGAGGTGACAGGCTTGGCTCAAAGGGCTTCTTCATCCAGCCAACCGTCTTCTCCAATGTTCAGGATGATATGTTGATAGCAAAGGATGAAATCTTCGGCCCAGTTCAAACCATCTTGAAATTCAAGGACATCGATGAAGTAATAATGAGAGCAAATGCAACGACGTATGGTCTGGCTGCAGGAGTGTTCACGAAGAACGTTGACACAGCCAACAGACTGATGAGGGCACTGAGAGTTGGAACGGTGTGGATTAATTGCTTTGATGTGTTCGATGCTGCCATACCTTTTGGTGGCTACAAGATGAGTGGGATGGGCAGGGAAAAGGGAATCTATAGTCTTAACAACTACTTGCAGGTCAAAGCTGTGGTTTCCCCGTTGAAGAATCCTGCTTGGATCTAA 1605 0.4648 MAARRLSSLLSRSLSTSLLHSPGRIYGRWKNINRFSTAAAAEELITPHVQISYTQHLINGQSVDAASGKTFPAYDPRTGEVIAHVAEGDAEDINRAVSAARKAFDEGPWPKMTAYERCRILLRFADLVEKHSTELAALETWNSGKPYEQSAKSELPLFVRLFHYYAGWADKIHGLTVPADGDYHVQVLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLLHEAGLPPGVLNVVSGYGPTAGAPLASHMDVDKLAFTGSTKTGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVNKAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKAKARALRRIVGDPFKKGVEQGPQIDQEQFAKVLRYIRSGIESNATLECGGDRLGSKGFFIQPTVFSNVQDDMLIAKDEIFGPVQTILKFKDIDEVIMRANATTYGLAAGVFTKNVDTANRLMRALRVGTVWINCFDVFDAAIPFGGYKMSGMGREKGIYSLNNYLQVKAVVSPLKNPAWI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0552 534 Pfam Aldehyde dehydrogenase family 65 524 IPR015590 GO:0016491
Dere14g0552 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 68 524 IPR016162 GO:0016491
Dere14g0552 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Dere14g0552 534 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 38 524 - -
Dere14g0552 534 FunFam Mitochondrial aldehyde dehydrogenase 2 306 495 - -
Dere14g0552 534 CDD ALDH_F2BC 51 525 - -
Dere14g0552 534 SUPERFAMILY ALDH-like 49 527 IPR016161 GO:0016491
Dere14g0552 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 300 307 IPR029510 GO:0016491
Dere14g0552 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Dere14g0552 534 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 58 319 - -
Dere14g0552 534 FunFam Aldehyde dehydrogenase, putative 496 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0552 Dere-ChrDere14 5678104 5681505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0552 1 534 Aldehyde Dehydrogenase Gene Family AT3G48000 79.554 0.0 905