Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0548 ATGGCGGGAAATTTCTGTAGAGTCACTGCAATTCTTTGTAGCTCTAGCAGTTTTTTGATTCTTTTAAGTTACGCGTTTGCGCTTGCACTGGCTTCCTACTATGGTTTTGAGAGAGACAAAATAGAACAACCTCTTTTGTCCATGAGTTCTCCTAAGTATTGTCTAGTGCACAGCTTGGAATTTGTCCCTGGTGTCTCTTGTATAGACTTCGATGATACGAGATCAAGTATAAGTCGACCGGCCAAACCCTTGGTTGGATCTCTGCACCCATTTACTGGGAAATTCAGTAAAGATGTGTCAAGATCATATATTAATTTGTTGAACTTGGTATCAGGGGACAATTCAAATTCCCCTCGAAGTCCTAGATCTCTAATGCAAGTTATGACTGATCCAGGAATCATGTCCAATAATGATGATGATTTGCATGCTCTCTCTTCAGAAAACCGTCAAAAGATAGTTATAGTAGCAAATTTTCTTCCTCTTAATGCTCGACGGGATGAATCTGGCAGGTGGTGCTTTAGCTATGATGAAGATTCAATTTTATTACAGCTAAAGGATGGTATCTCTTCTGATATTGAAGTTGTTTATGTGGGATCTCTAACTGTTGACGTTGATGCAAGTGAACAAGAGGAAGTTTCTCTTGAATTGCAGGAGAGATTCAAATGCTGGCCTACTTTTCTTCCTCCAGACATCCAGAAAAAGTTTTATCATGGATTCTGCAAGCAGTATTTGTGGCCTCTTTTCCATTACATGTTGCCCATGAATCCAGCTTATGACAATCGCTTCGATAGGTCACTTTGGCAGCCTTATGTTTCGGCCAATAAGAAATTTGCAGATAAGGTCATGGAAGTTGTTAATCCAGAAGATTATGTATGGATTCATGATTATCATCTTATGGTCCTACCAACATTTCTGCGCCATCGATACTATAGGGTCAAGCTAGGATTTTTCCTCCACAGCCTATTTCCTACACCAGAAATTTACAAGACTCTGCCTGTAAGAGCAGAGATTTTGAAAGCTCTGCTTAATTCAGATTTAATAGGTTTTCATACATATGATTATGCTCGCCATTTTTTGTCTTGCTGCAGTCAGATGCTTGGTTTGGAATATGAATCCAAAGGGGATTACATTGGGATTAAATACTTTGGCCGTACAGTAAACATAAAAATTTTGCCTGCAGGGATTCATATGGGTCGACTTCTGTCTTCCTTAAATCACCCATGTTCATCTGTCAAAGTCAAAGAAATCCGGGAGCAATTTAAGGGGAAAAATATCGTTCTTGGTGTTGATGATATGGACATATTCAAAGGCATTGATCTAAAGCTCTTGGCCATAGAACAGCTACTATTGCAGAGTCAAGGTCTGCAAGGTAAATTAGTGTTTGTGCAGATTCTGAATCCCCCAAGGAGTGCAGGCATCGATGTTCAGGAAGCAATGGAGGAGATATACCTTACTGCCAACAGGATAAATGGAAAGTTTGGCTCCGCAGGTTATGAACCTGTCATCATAATTGATCATCCTATACCTTCCTATGAAAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTGAGGGATGGTATGAATTTAGTTCCATACATGTATATTCTCTGTAGGCAGGGGACTCCAGAAATGGATGAAGCAGTGGATCCTAAGTCCCCTCGTACAAGTGCTCTTGTTGTTTCTGAGTTCATCGGTTGCTCACCATCCCTCAGTGGGGCTTTCAGGGTGAACCCATGGGACATTGATGCTGTGACTGAAGCACTATTTTTGGCCATCAATATGCCCAGTCAAGAGAAACACTTAAGGCATGAGAAGCACTACCAATATGTTAGCTCTCATGATGTGGCTTACTGGGCCAGAAGTTTTATGCAAGATCTCGAGCGTTCATGCACATATCACCATACTAACCGTTGCTGGGGCCTTGGCTTTGGTCTGAGTTTCAGAGTCTTGTCCTTTTCTCCTAATTTTAGGAAGCTGTACATGGACCATGTCGTCTCTGCATATAAAAAGACTAATTGCAGGGCAATATTTTTGGACTATGATGGCACACTTGTTCCCCAAGCTTCCGTTGTCAAAAGCCCTAGTCCTGAAGTCATATCTGTTGTAAATAACCTTTGCCGTGACCCTCAGAACACTGTGTTTATAGTAAGTGGCAGGGGGAAGACCTCACTGAGCGAATGGTTCAATCCATGTGAGGATCTTGGCATAGCAGCTGAGCACGGTTATTTTATAAGGTGGGATAAAAGTTCAAGCTGGGAAACCAGTGGTATAGTTACAGATTTTACTTGGAAAAGAATTGTTGAACCTGTGATGAGATCATATACCGAATCAACTAGTGGCTCCTATATAGAGACCAAGGAAACTGCCTTGGTATGGCATTATTATGAAGATCATTCTGGATTTGGATCTTCGCGGGCCAAGGAGCTATTGGATCGCCTTAAAAGTGTACTTGCAAATGAGCCTGCAGTTGTGAAAAGAGGACAGTATATTGTTGAAGTCAAGCCACAGGGGATCACTAAAGGATTAGTTACAAAGCAAGTTCTTTCTACCCTGGAAAAGAATGGGAATCCGCCTGATTTTGTGCTGTGCGTCGGGAATGACAGATCCGATGAGGATATGTTTGAGAGCATTTCAAACGAAGCTCAAATTGCAGCACTGTCTCCAGAACCAGAGATCTTTACATGCACTGTGGGACTAAAGCCAAGCAAGGCTATGTACTACCTGGATGACACCATGGATGTTATGACGACTCTTCAAGCACTTGTGGGTTCTGGGTCTAACTCAAGATGCTCGGAAGAAGTCCCTAGTGAATCAAGCATAGTGTGTTTCGAACGATTTGCTTGA 2859 0.4183 MAGNFCRVTAILCSSSSFLILLSYAFALALASYYGFERDKIEQPLLSMSSPKYCLVHSLEFVPGVSCIDFDDTRSSISRPAKPLVGSLHPFTGKFSKDVSRSYINLLNLVSGDNSNSPRSPRSLMQVMTDPGIMSNNDDDLHALSSENRQKIVIVANFLPLNARRDESGRWCFSYDEDSILLQLKDGISSDIEVVYVGSLTVDVDASEQEEVSLELQERFKCWPTFLPPDIQKKFYHGFCKQYLWPLFHYMLPMNPAYDNRFDRSLWQPYVSANKKFADKVMEVVNPEDYVWIHDYHLMVLPTFLRHRYYRVKLGFFLHSLFPTPEIYKTLPVRAEILKALLNSDLIGFHTYDYARHFLSCCSQMLGLEYESKGDYIGIKYFGRTVNIKILPAGIHMGRLLSSLNHPCSSVKVKEIREQFKGKNIVLGVDDMDIFKGIDLKLLAIEQLLLQSQGLQGKLVFVQILNPPRSAGIDVQEAMEEIYLTANRINGKFGSAGYEPVIIIDHPIPSYEKAAYYALAECCIVNAVRDGMNLVPYMYILCRQGTPEMDEAVDPKSPRTSALVVSEFIGCSPSLSGAFRVNPWDIDAVTEALFLAINMPSQEKHLRHEKHYQYVSSHDVAYWARSFMQDLERSCTYHHTNRCWGLGFGLSFRVLSFSPNFRKLYMDHVVSAYKKTNCRAIFLDYDGTLVPQASVVKSPSPEVISVVNNLCRDPQNTVFIVSGRGKTSLSEWFNPCEDLGIAAEHGYFIRWDKSSSWETSGIVTDFTWKRIVEPVMRSYTESTSGSYIETKETALVWHYYEDHSGFGSSRAKELLDRLKSVLANEPAVVKRGQYIVEVKPQGITKGLVTKQVLSTLEKNGNPPDFVLCVGNDRSDEDMFESISNEAQIAALSPEPEIFTCTVGLKPSKAMYYLDDTMDVMTTLQALVGSGSNSRCSEEVPSESSIVCFERFA 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0548 952 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 126 926 IPR001830 GO:0003824|GO:0005992
Dere14g0548 952 Gene3D Glycogen Phosphorylase B; 402 616 - -
Dere14g0548 952 NCBIfam trehalose-phosphatase 679 927 IPR003337 GO:0003824|GO:0005992
Dere14g0548 952 Pfam Trehalose-phosphatase 682 916 IPR003337 GO:0003824|GO:0005992
Dere14g0548 952 FunFam Alpha,alpha-trehalose-phosphate synthase 403 616 - -
Dere14g0548 952 SUPERFAMILY HAD-like 679 927 IPR036412 -
Dere14g0548 952 Pfam Glycosyltransferase family 20 151 632 IPR001830 GO:0003824|GO:0005992
Dere14g0548 952 NCBIfam HAD-IIB family hydrolase 680 881 IPR006379 -
Dere14g0548 952 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 678 795 - -
Dere14g0548 952 CDD HAD_TPP 680 920 - -
Dere14g0548 952 Gene3D Glycogen Phosphorylase B; 142 401 - -
Dere14g0548 952 CDD GT20_TPS 151 632 IPR001830 GO:0003824|GO:0005992
Dere14g0548 952 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 808 939 - -
Dere14g0548 952 Gene3D - 678 793 IPR023214 -
Dere14g0548 952 Gene3D - 807 938 IPR023214 -
Dere14g0548 952 FunFam Trehalose-6-phosphate synthase 8 146 402 - -
Dere14g0548 952 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 151 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0548 Dere-ChrDere14 5625802 5630587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0548 99 949 Trehalose Biosynthesis Gene Families AT1G23870 63.615 0.0 1142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0805 03 12614812 12617660 Dere14g0548 14 5625802 5630587 CCT
Dere14g0548 14 5625802 5630587 Dere14g0548 14 5625802 5630587 ECH