Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0527 ATGGCTCCCGCCGGCGATGTTCTCAGGCAGACTCTAGAGGAGTCCCCTTCCGGTGCGGGCACACTGCATGTTCTAGCCGTTGATGACAGTCTTGTCGATCGTAAGGTCATTGAACGCTTGTTGAAAATTTCTTCTTGTAAAGTGACGGTTGTAGAGAGTGGAACTAGAGCTCTTGAATATCTGGGACTGGGTGGAGAGAAGAACTCCATTGGGTTTGAGAGTGTCAAGGTTAATCTGATAATGACGGACTATTCCATGCCCGGGATGACAGGATATGAACTGCTCAAGAAGATCAAGGAGTCATCTATCTTTAGAGAGATTCCAGTGGTGATCATGTCATCTGAGAATATCTTGACTCGAATCGATAGGTGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCGGTAAAGTTGTCCGACGTGAAGCGCTTGAAAGAATTCATAATGAAGGGTGAAGGGAAGGAGAGTGGAGCAAAACCATTTCTCAAAAGAAAGCCATCAGATGATTGTAGTCCATTTCCAACAACTCCATTCTCATCAGTCTCTCATCCTTGTGATCCATCTTCTTCACCATCGGCATTGTCCTCAAAGAAACCTAGATTGCGAGCAGAGATTGAATAA 624 0.4567 MAPAGDVLRQTLEESPSGAGTLHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALEYLGLGGEKNSIGFESVKVNLIMTDYSMPGMTGYELLKKIKESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLKEFIMKGEGKESGAKPFLKRKPSDDCSPFPTTPFSSVSHPCDPSSSPSALSSKKPRLRAEIE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0527 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 203 IPR045279 GO:0009736
Dere14g0527 207 Gene3D - 22 165 - -
Dere14g0527 207 CDD REC_typeA_ARR 24 145 - -
Dere14g0527 207 SMART REC_2 22 146 IPR001789 GO:0000160
Dere14g0527 207 MobiDBLite consensus disorder prediction 174 207 - -
Dere14g0527 207 SUPERFAMILY CheY-like 22 145 IPR011006 -
Dere14g0527 207 Pfam Response regulator receiver domain 24 142 IPR001789 GO:0000160
Dere14g0527 207 ProSiteProfiles Response regulatory domain profile. 23 150 IPR001789 GO:0000160
Dere14g0527 207 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0527 Dere-ChrDere14 5413817 5415607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0527 22 155 Response Regulator Gene Family AT3G48100 81.481 1.10e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere14g0527 Response_reg 8.9e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1272 13 17558129 17559187 Dere14g0527 14 5413817 5415607 ECH
Dere14g0527 14 5413817 5415607 Dere14g0527 14 5413817 5415607 ECH