Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0516 ATGGTGTCCACGTCTCAGAAGAAAAGCCTTCACTCCCTCCTCGCTGCAAACCTTGGTAAGCTCACCATACCTTCTTCCTCCTCCACTACCCATCATGATTTCGACTTTTGCCCCTTCTCGTCCCACGATCCCATTCCATCTCCTTCTACGGCCATTCCTGGGAGCCCACAAGTTATTCAGAGTAGGTCCCACTCCTTTGTGGGCCCCTCACCACGATTTGCCCAATCCTCCAATTCCCTCGCATTTCTTGATCAACTCGATTCCGAAAGCGAAGACGAGGCTGAATTTGATGTTGAAAGTGGGTTAGGGACAGATTGTGCAGTTGATGAAAAGCGAGTGGGTGTGAGTGATTCTGGAGAGAAAGTGGCCAGCAAAATTGGACCTGGTGATTTTCAGATTATGAGAGTTGTGGGGCAGGGTGCGTTCGGGAAGGTCTTTCAGGTGAGGAAAAAGAGGGACCGTTTGGATGGAGAGGGAGGTGTTGGTGGTCATGGCGATGGCATTTTTGCAATGAAGGTGATGCGGAAGGAGACGATCATAAAGAAGAATCATGTGGATTATATGAAAGCTGAGAGAGATATTCTTACTAAAGTGGTTCATCCTTTTATAGTTCAGCTCCGGTATTCTTTTCAGACCAAGTCAAAATTATATTTGATCTTGGACTTCATAAATGGGGGACATCTCTTCTTTCATCTGTATCGGCAGGGTATCTTCAGTGAGGATCAGGCAAGGATTTACGCTGCTGAGATAGTATCTGCTGTTTCCCATCTTCACAAGAGCGGAATCGTGCATCGGGATCTTAAACCTGAAAATATACTTATGGACGCTGATGGGCATGTAATGCTGACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGTAGATCCAACTCTTTGTGTGGCACCACAGAATATATGGCTCCAGAAATTTTACTGGCTAAAGGCCACAACAAGGAGGCAGATTGGTGGAGTGTCGGTATACTGTTGTATGAAATGCTAACAGGGAAGCCCCCATTTATGCATTCTAACAGAAAGAAACTTCAAGAGAAAATTGTTAAAGAGAGAGTGAAACTTCCACCACTCCTTAGCAGTGAAGCTCACTCTTTGCTTAAAGGATTGCTGCAAAAGGATCCATCAAGAAGGTTAGGCAATGGATCTAATGGAGACAACCAGATCAGAAGTCACAACTGGTTTCGCTCAATCAATTGGAAGAAACTGGAGGCAAGAGAATTGCAGCCAAAATTCAGGCCAGATGTGACTGGGATAGACTGTACAGCTAATTTTGATCAATGCTGGACCTCAATGCCTCCTGATGACTCACCAGCACCCACCCCTACAGCATCTGACCATTTTCAGGGATATACTTATGTGGCACCAAACCCTTGGCTTTCGTCTAGCTAG 1404 0.4544 MVSTSQKKSLHSLLAANLGKLTIPSSSSTTHHDFDFCPFSSHDPIPSPSTAIPGSPQVIQSRSHSFVGPSPRFAQSSNSLAFLDQLDSESEDEAEFDVESGLGTDCAVDEKRVGVSDSGEKVASKIGPGDFQIMRVVGQGAFGKVFQVRKKRDRLDGEGGVGGHGDGIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYAAEIVSAVSHLHKSGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESGRSNSLCGTTEYMAPEILLAKGHNKEADWWSVGILLYEMLTGKPPFMHSNRKKLQEKIVKERVKLPPLLSSEAHSLLKGLLQKDPSRRLGNGSNGDNQIRSHNWFRSINWKKLEARELQPKFRPDVTGIDCTANFDQCWTSMPPDDSPAPTPTASDHFQGYTYVAPNPWLSSS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0516 467 SUPERFAMILY Protein kinase-like (PK-like) 129 461 IPR011009 -
Dere14g0516 467 ProSiteProfiles Protein kinase domain profile. 131 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0516 467 FunFam Non-specific serine/threonine protein kinase 223 418 - -
Dere14g0516 467 Gene3D Phosphorylase Kinase; domain 1 130 442 - -
Dere14g0516 467 Pfam Protein kinase domain 131 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0516 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Dere14g0516 467 SMART serkin_6 131 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0516 467 ProSiteProfiles AGC-kinase C-terminal domain profile. 400 467 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere14g0516 467 SMART pkinase_C_6 400 459 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere14g0516 467 Pfam Protein kinase C terminal domain 420 457 IPR017892 GO:0004674|GO:0005524|GO:0006468
Dere14g0516 467 Gene3D Transferase(Phosphotransferase) domain 1 223 418 - -
Dere14g0516 467 PANTHER RIBOSOMAL PROTEIN S6 KINASE 90 461 - -
Dere14g0516 467 FunFam Non-specific serine/threonine protein kinase 129 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0516 Dere-ChrDere14 5333113 5336795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0516 56 460 AGC Kinase Gene Family AT3G08720 60.775 6.25e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Dere14g0516 Pkinase 2.1e-71 CL0016