Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0514 ATGGATCCTCCCCTCATCAACGAGTCTACATTCTCTCCCGCGAATCCATCGGCTTATAGTCTCGCTGAGATTTGGCCCTTCAGTGGGGACCCCACTGCCGGAGGAGGATTGGGCCTCCGAATGGGCCATTTAGGTCAGAATTTGGGCGGGTTTGCCGAAAATTCCCTGCATCGAGATGGGTCGGCGGAGGAGTCCACCGTGACGGAGCAGAGCGGTGGAGGAGGCGCTGCTGCTGCTGGTAGTGCCAGTGGAAATCGAAGAAAGAGAAAAGATGCCAGCTCTGAGGACGAGTCCTCAAAGATGGTTTCGATGAGTAATGCCAATGACTTGAATGATTCTGGCAACAAACGAATAAAATTAGGAGGATCCAGGGATGAACATGGTGGTCTGAAGGCTGAAGCAGAAGCAAGTTCAGTAGCAGGGAGCAAGTCAGCTGAACAAAGCACTAAACCTTCTGAGCCTTCTAAGCAAGACTACATACATGTGAGAGCAAGACGAGGTCAAGCAACTGATAGCCACAGTCTTGCAGAAAGAGCAAGAAGGGAGAAGATCAGTGAGAGGATGAAAATTCTTCAAGATTTGGTCCCTGGGTGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGAGATAATCAATTATATTCAATCGCTACAGCGGCAGGTTGAGTTCCTTTCGATGAAGCTTGAAGCAGTTAATTCGAGAATGAACACAAACCCAACTATTGAAGGGTTCCCTTCAAAAGATCTTGGTGCTCAGACATTTGACGTTGCTGGAATGATATTTGGATCACAAGCAGGTAGGACGTATGCTCAGGGAACACAGCCTGGATGGCTGCATATGCAGACAGGTGGTGGTTTTGAGCGAGCAACATAG 876 0.4863 MDPPLINESTFSPANPSAYSLAEIWPFSGDPTAGGGLGLRMGHLGQNLGGFAENSLHRDGSAEESTVTEQSGGGGAAAAGSASGNRRKRKDASSEDESSKMVSMSNANDLNDSGNKRIKLGGSRDEHGGLKAEAEASSVAGSKSAEQSTKPSEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTIEGFPSKDLGAQTFDVAGMIFGSQAGRTYAQGTQPGWLHMQTGGGFERAT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0514 291 CDD bHLH_AtBPE_like 158 241 - -
Dere14g0514 291 MobiDBLite consensus disorder prediction 118 132 - -
Dere14g0514 291 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 218 IPR011598 GO:0046983
Dere14g0514 291 MobiDBLite consensus disorder prediction 140 155 - -
Dere14g0514 291 Gene3D - 165 243 IPR036638 GO:0046983
Dere14g0514 291 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 66 261 IPR024097 GO:0006355
Dere14g0514 291 Coils Coil 215 235 - -
Dere14g0514 291 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 237 IPR036638 GO:0046983
Dere14g0514 291 FunFam Basic helix-loop-helix transcription factor 165 238 - -
Dere14g0514 291 MobiDBLite consensus disorder prediction 30 159 - -
Dere14g0514 291 SMART finulus 174 224 IPR011598 GO:0046983
Dere14g0514 291 MobiDBLite consensus disorder prediction 98 113 - -
Dere14g0514 291 Pfam Helix-loop-helix DNA-binding domain 172 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0514 Dere-ChrDere14 5322214 5324910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0514 1 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 55.405 5.47e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g0514 HLH 2.4e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0514 14 5322214 5324910 Dere14g0514 14 5322214 5324910 ECH