Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0503 ATGGACGGTGGCGAAACTAACCTATGTGCGCCGGATAAGGAGGAGAATGATGAAGAGGACACGCCAGATTGTCTCTCCCGTGTTCGACTTGTCGATGCTCCCATACTCTTTTTCGTTTGCTTCCACAAGGCTCTGCGCGGGGAACTCGACGAGCTTAGGCGCTTGGCGGAAAGGCCTTTGGTAGAGAATGTGTCTCACAGCCGCCAGCTTATTCTTGAGCTTCAACGAAGATTCAAGTTTCTCAAACTTGCTCTCAAATATCATTGCGTTGCGGAAGACGAGCTTATCTTCCCTGCATTGGATGTACATGTGAAAAATGTGGTATGTACATATTCTTTTGAACATAATAGCAATGATGACCTCTTCCATTCCATCTTTCGCTGTTTAGATGAGTTGATAGATCCAAATGAGAATATTTCCAACCTGTTTCAAGAACTTGTACACTGTATTGGAATCTTGCAAACTTTCATATTCCAGCATATGTCCAAAGAAGAAGAGCAGGTTTTTCCTCTATTATTGCAGAAAATTTCTACCAACGAACAGGCTTCGCTGGTCTGGCAATTCATATGTAGTGTTCCTATAATGCTGCTGCAAAATTTTTTGCCGTGGATGGTATCCTTCCTTTCTGCAGACAAACAAGCAGAAGTTCGGCAGTGTTTAAATGAAATTGCATCAATGGAAAAAGAACTGCAAGAGGTTTTGATTTCTTGGCTTGGTAGCAACACCCAAGCCTTCACCGATGTTTTTCTTCTGAGTGAAGAAGTTCAATGTGCTGATGGATCTCCACATATGGAAAGATCACTTGGGTTGAGTTCTTGCAATAGAAATTTCAAAGCAATTTTAAATCAGAGGAACGCAAGTTGCCTAGACGTAGAAAATAGAGCCGACCAAGTAAATGTTCTTCATCTTTGGCATGACGCCATCAAGAAAGATATGAAAGAAATTCTAGAAGAACTTTATCAAGTCAGAAACACCACCTGTTTCCAAAATTTGGATTCAATACTCATCCAACTAAAATTCTTCGCTGATGTCCTCATCTTCTACAGCAATGCTCAGAAGAAATTCTTTCATCCAGTTTTGAGTGAACTTGCTTATGGTTGGCTGATCAATTCTACTGAAATATTTCTCATTGAAAGTCACATTGAAGATTTACAGCGGTTGCTATACTATAATGTTGAAAGCGGTATGCATTTGTGCAAATTCGTGGAGAAGCTTTGCAGTGAGCTTGAATTATTTATGAGAGGAGTTAACAAACAATTTGCTTTTCAAGAAACTGAGGTATTTCCTGTCATTCGAATGAATGGCAACAAAGGAATGCTAGAGGGGCTCATGAGCTTGGGCCTGCATATGATGCCACTCGGGTTGCTGAAGTGTGTGATAACTTGGTTTTCGGCTCACTTGTCTGAAAATGAATCCAGGTCCATTCTCAGTTGCATAAAACAAGGAAATCCTTTTGTCCATGAATCGTTTGCATCACTATTACACGAGTGGTTCCGCGTTGGTCATTCAGGTAAAACTTCTATTGAAAAGTTCCGACAAGACTTGAGACATATTTTTAAAAGCAAAGGCTCTTTGTTAACTGAGCAAGTTAAGGAAGCTCCTAGGTTTTCTTTATCAAATAATGACAGACCTCATGAAGGATCTATTGGCAAGAATGGCCTGTGTTATTCATCATCTCCTGGATTCAATAATGTGACCAAGTATGATACACCGTACTCTACAGGAATTAATATGCATATATTTTTTCCTGCCACAGCTATGAAGTTACATCTCTGTCCTGGATTTCAGGCGGCGAAGAGTTATTCTGTTCCCTCTCTTGATGATCCAAAACCAGTTGACATAATATTTTTCTTTCACAAGGCTATCAAGAAAGATTTGGATTACCTTGTTCTTGGATCAGCTCAGTTAGAAAAAAATGTTGAGTTGCTTGTGACTTTCACTAAACGATTCCATCTAATATGCTTTCTTCATCGAATTCATAGTGAGACAGAGGATGAGATAGCATTTCCGGCCTTGGAGGCAATGAGTAAAGTGAAAAACATTAGCCTCTCTTATACCATTGATCACAAACTTGAAGTTGAACACTTCAATAAAATATCCTGCGTCCTTGATAAGATGTCGGTTCTACATCTTTCAGTTTCTAGTTTTGAAACAAATACATGGGAGCAGAGAATGCCAGAACATTATCAACTGTGCAGAAAGCTGCAAGAAATATGCAAGTCAATGCATAAAGTACTTTCCGACCATGTAAATCGTGAAGAAATTGAAATTTGGCATTTAATTAGAGATTTCTTCGCCAACAAGGAGCAAATAAAAATCGTAGGATGCATGCTTGGAAGAATTAGGGCAGAAATATTACAAGATATGATACCCTGGTTAATGGCTTCTTTAACCCCAGAAGAACAGCATGTCTCAATGTTCTTATGGTCCATGGTAACTAAAAATACGATGTTTGATGAATGGTTAGCTGAGTGGTGGGAGGGGTACAGTATAGCAAAAGAAACAGATAGATCAAATGACCCGCCTCTACAGACTGTTGAGCCTTTGGAGATCATTTCCAAATATTTATCTGAAGAAGTTCTTGATGAACTACAAGAAGAACACACTTACAAAAAAAGCATAATTTATTCACAGAGGGATCATATTGGTGATAAAAATGAGCAGTCTCACAATTGCAATCTTGATGGAAAAGACCAGGTTCTTAGTGCAAAACAAGATAGTAGTGAATGTTCAGAATGCACAAATCAATTGAGTGATAATAACAAACAAACTTGCGCTAAAGTAACGGATATTACAAGTTCGATAAATGATAAAGGTCAGTCTTTTCAATTCCGTGAAAACTTTGGGCATTATGACCGTCTTATGAAGATAAGTCAAGATGATCTAGAGATGGCCATAAGAAGGGTGTCTCGTGACTCTTCCTTAGATCTGCAGAACAAGTCATATATAATCCAGAACCTGCTGATGAGCCGTTGGATTGTTAGGCAGCAGATCTCTTGCTCAGAAACCACTGTCACAAGCGACGGGCTGGAATTTCCTGGGCAACATCCATCTTACAGGGACCCTCTCAAACTAGTTTATGGCTGTAAACACTACAAGAGAAACTGTAAGCTTTTTGCTTCCTGTTGCAACCAACTTTATACATGCATACATTGCCATAATGAGGTATCAGATCATTCACTTGACAGGAAATCTATTACCAAGATGATGTGCATGAAGTGCTTGATGATTCAGCCAATCGGTGCCACTTGTTCAACAGTATCTTGCAGTAACTTATCCATGGCAAAATACTACTGCAGGATCTGTAGATTATTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGTGTAGACTACTTTCATTGTATGAATTGCAATGCTTGCATGTCTCGATCCCTTACAGTTCATGAATGCAGAGAGAAATTTCTAGAGGATAACTGCCCAATTTGTCATGAATACATCTTTACATCCTGCTCTCCAGTAAAGGCCCTTAGATGTGGTCATGTCATGCACTCAACATGTTTTCAGGAATATACTTACTTTAACTATACCTGCCCAATATGTTGCAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGATACGCTATTGGCTGAAGAGAAAATTCCGGAAGAGCATTTGGGTCAAACTCAGGTTATACTATGCAATGATTGTGAAAAGAAAGGAGCAGCTCCCTTCCACTGGCTTCACCACAAATGCCCTTCTTGTGGTTCCTACAATACCAGAGTTCTGTGA 3795 0.3953 MDGGETNLCAPDKEENDEEDTPDCLSRVRLVDAPILFFVCFHKALRGELDELRRLAERPLVENVSHSRQLILELQRRFKFLKLALKYHCVAEDELIFPALDVHVKNVVCTYSFEHNSNDDLFHSIFRCLDELIDPNENISNLFQELVHCIGILQTFIFQHMSKEEEQVFPLLLQKISTNEQASLVWQFICSVPIMLLQNFLPWMVSFLSADKQAEVRQCLNEIASMEKELQEVLISWLGSNTQAFTDVFLLSEEVQCADGSPHMERSLGLSSCNRNFKAILNQRNASCLDVENRADQVNVLHLWHDAIKKDMKEILEELYQVRNTTCFQNLDSILIQLKFFADVLIFYSNAQKKFFHPVLSELAYGWLINSTEIFLIESHIEDLQRLLYYNVESGMHLCKFVEKLCSELELFMRGVNKQFAFQETEVFPVIRMNGNKGMLEGLMSLGLHMMPLGLLKCVITWFSAHLSENESRSILSCIKQGNPFVHESFASLLHEWFRVGHSGKTSIEKFRQDLRHIFKSKGSLLTEQVKEAPRFSLSNNDRPHEGSIGKNGLCYSSSPGFNNVTKYDTPYSTGINMHIFFPATAMKLHLCPGFQAAKSYSVPSLDDPKPVDIIFFFHKAIKKDLDYLVLGSAQLEKNVELLVTFTKRFHLICFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKLEVEHFNKISCVLDKMSVLHLSVSSFETNTWEQRMPEHYQLCRKLQEICKSMHKVLSDHVNREEIEIWHLIRDFFANKEQIKIVGCMLGRIRAEILQDMIPWLMASLTPEEQHVSMFLWSMVTKNTMFDEWLAEWWEGYSIAKETDRSNDPPLQTVEPLEIISKYLSEEVLDELQEEHTYKKSIIYSQRDHIGDKNEQSHNCNLDGKDQVLSAKQDSSECSECTNQLSDNNKQTCAKVTDITSSINDKGQSFQFRENFGHYDRLMKISQDDLEMAIRRVSRDSSLDLQNKSYIIQNLLMSRWIVRQQISCSETTVTSDGLEFPGQHPSYRDPLKLVYGCKHYKRNCKLFASCCNQLYTCIHCHNEVSDHSLDRKSITKMMCMKCLMIQPIGATCSTVSCSNLSMAKYYCRICRLFDDEREIYHCPYCNLCRVGKGLGVDYFHCMNCNACMSRSLTVHECREKFLEDNCPICHEYIFTSCSPVKALRCGHVMHSTCFQEYTYFNYTCPICCKSLGDMQVYFRMLDTLLAEEKIPEEHLGQTQVILCNDCEKKGAAPFHWLHHKCPSCGSYNTRVL 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0503 1264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1152 1201 IPR013083 -
Dere14g0503 1264 Coils Coil 209 236 - -
Dere14g0503 1264 MobiDBLite consensus disorder prediction 1 20 - -
Dere14g0503 1264 Gene3D nmb1532 protein domain like 34 190 - -
Dere14g0503 1264 Gene3D nmb1532 protein domain like 607 779 - -
Dere14g0503 1264 CDD Hr-like 613 758 - -
Dere14g0503 1264 FunFam Zinc finger protein-related isoform 1 1153 1202 - -
Dere14g0503 1264 SUPERFAMILY CHY zinc finger-like 1020 1085 IPR037274 GO:0008270
Dere14g0503 1264 ProSiteProfiles Zinc finger CTCHY-type profile. 1094 1157 IPR017921 -
Dere14g0503 1264 Pfam Hemerythrin HHE cation binding domain 42 172 IPR012312 -
Dere14g0503 1264 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 656 1264 - -
Dere14g0503 1264 SUPERFAMILY RING/U-box 1147 1204 - -
Dere14g0503 1264 CDD RING-H2_Pirh2-like 1157 1199 - -
Dere14g0503 1264 SMART ring_2 1158 1199 IPR001841 -
Dere14g0503 1264 ProSiteProfiles Zinc finger RING-type profile. 1158 1199 IPR001841 -
Dere14g0503 1264 ProSiteProfiles Zinc finger CHY-type profile. 1022 1091 IPR008913 GO:0008270
Dere14g0503 1264 Pfam CHY zinc finger 1029 1104 IPR008913 GO:0008270
Dere14g0503 1264 CDD Hr-like 41 170 - -
Dere14g0503 1264 SUPERFAMILY Zinc hairpin stack 1095 1149 IPR037275 -
Dere14g0503 1264 Gene3D - 1229 1264 - -
Dere14g0503 1264 Pfam Zinc-ribbon 1205 1262 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0503 Dere-ChrDere14 5201254 5213466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0503 33 854 C2H2 Transcription Factor Family AT3G18290 31.661 1.33e-121 406