Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0502 ATGGGGCATAAAAAGCGAAACCCTGCTCCACGTTCTAAACAATCTGCGGCGGCTTCTCCGGTGACACAATCTGCCATCGGCGGAGCCGCCATTGGTGCCACTTCAGCCGAGCCCGAGTTTTGCATGAGTTCTAATCACACTAATCACAGCGCGACTAAGATCGAACTACCTCCTCAATCTGAGCCTTCGGCCTACTCCGCAATCAAGCTTGAATGTGAACGAGCCCTCACTGCGCTCAGGCGTGGTAACCACACCAAGGCACTGAGGCTTATGAAGGAGTCATGCTCCAGACACGAGAGCTCGGCTTACTCGGCCTTGATTCACCGAGTTCAGGGTACCGTGTGTGTCAAAGTGGCGTCAATTATTGATGACCCAAGTGCGAAGCAAAGGCATTTGAAGAATGCAATTGAGTCGGCACGAAAAGCAGTTGAGCTGTCCCCCAGTTCTATCGAGTTTGCACATTTTTATGCAAATTTGTTATACGAGGCAGCAAATGATGCGAATGAATACGAGCACGTGGTGAAGGAGTGTGACAGGGCTCTCTCGATTGAAAATCCAATCGATCCTGCGAAGGAGAGCTTGCAGGATGAGAGCCAGCAGAAAATATCAACTGCTGACGCTCGGATAGCTCATGTGCAGAATGAGTTGCGGCAGCTAATTCAGAAGTCAAACATAGCTTCCTTATCAACGTGGATGAAAAATCTGGGTAATGGGGAGGACAAAATCCGTTTGATTCCGATAAGGAGGGCTTCGGAGGATCCAATGGAGGTGAGGTTGGTTCAAACTAGAAGGCCAAATGAGATCAAGAAGGTGACCAAGACACCGGAAGAGAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGCTATTGCAGCAAAAGTCTGAGTCACCCCAATCCCAGAACGAAGGTGACAGGACATTGGATTCATCTTCAGCATCTGGGCAGAGGTTAAATGAGAGGCGGAAGTATGGACATGTGCGAAAAGCTGGTTCTACATCTGAAAGGAGAGATTGGGTACATTCGTATTGGAATTCATTGAGTGTTGATTTGAAGAAGGAGTTGCTTAGGATTAGGGTATGTGATCTCAAATCCCACTTTGGGTCTTCAAAGGATACTTTGCTGAATGACATATTAGCAGAAGCTTTGTCCTATGCTGAGGCTAACAAAACATGGAAATTCTGGCTTTGCTGCCGTTGTAACGAGAAATTTTCAGATTCAGAATCTCATATGCAGCATGTTGTGCAGGAACACATGGGTAATCTTTTACCTAAAATGCAGAGACTTTTGCCTCAAAATGTTGAAAATGAATGGATTGAGATGATTCTTAACTGTTCTTGGAAGCCTCTGGATGCCTCTGCTGCTGTTAAAATGCTTGAAAATGAAGCAAAATACAAAGATTTTTCATTTCCTGAGGATTCCTATATAGATCATCATATTGAGGAGCACCATGATTGTTTTGAAGATACAACTAATTCTTACCCTGAGAAGGGACATAGCCTCTATACTTGTACAGCAGAAAGAAGTAACTATTGTAAAACTGCAGAAACTAATATTAGAGATGGTGTTGAGGTCCAAGGGTCTATAGTATATTCCCTTGCTGATGGTTGGCCATTATCAGATGATTCTGAGCGTGCCAAACTTCTTGAGAGAATGCATGCAGTATTAGATATGCTTATTAGACACAAATATCTTGCTGCTAGTCATCTTAGCAAGGTCATACAATTTACTATGGATGAGATACAGGGTCTTGCTGCGGGATCTCAGCTTCTAAACCATGGTTTAGACCAAACACCAACGTGCATATGCTTTTTGGGAGCTTCCCAGCTTAAGAAAATTCTCAAATTTTTGCAGGAACTATCTCATGCTTGTGGTTTGGGTAGATATGCTGAGAAAAGTAATAGTCCCATGGATGATTTACACAATGCCAATCAAGTTCCTGAGATTAAAGAGAAGATTGTTCTCAATGCAGATGCATCATACCTCCTTCTGGATGAGTGCTTCGTGCCTGCAGAACTCACTCCTGGTGCAGCTGAGGGTGCTGTCGTGGATGATGTGATTGCCCCAACTTCTAATGATGGAGTTTTACACAATACCGATCCTTTCTTATCTTGGATATTTTCATGTTCATCTAGTGGGGATCAATTGACCTCATGGATGAGAACAAAAGAAGATAAAAGACATCAAGGGATAGAAATTGTCCAGACACTAGAGAAGGAGTTTTATCACCTACAGAGCCTTTCTGAGAAGAAATGTGAGCGCATGAGTTATGAGGAAGCACTGCAGGTAGTAGAGGACCTTTGTCTAGCAGAAGGTAAGAAGAGGGAGAATTTCACTGAATTTGTTCAGCGAAGCTATGGATCTGTTCTAAGAAAGCGGAGAGAAGAGCTCATAGAGAGTGAGAATGATGTTATGTATGCTAGCAACAGGTTTGAGTTGGATGCTATAACAAATGTTCTGCAAGAAGCAGAAGCAATGAATGTTAATCAATTTGGCTATGAGGAAACTTATGCCGGTACATGTGACTTGGAATCTGGTGAAGATGATGAATGGAGAATGAAGGAGTATTTGCATCAAATGGATAGTTACATAGAAATTGCTATTCAGAAATTGAAGGAACACCTATCTGTGGAGCTTAGCAAAATTGATGCACGAATCATGAGAAATGTTTCAGAGATGCAGCAATTGGAACTCAAGCTCGAGCCTGTTTCTGCTCATGATTATCGAGCAATAATACTGCCTTTAGTGAAGTTGTACCTAAGGGCACGTTTGGAAGATTTAGCTGAGAAAGATGCAAGGGAGAAGTCTGACGCTGCAAGAGAAGCATTTTTGGCTGAGCTTGCTCTTGATTCAAAGAAGGTTGTTAAAGGGGGAAGTGATAGTACAAGACATATGGAGAAAACAAAAGATAAGAAAAAGAATAAAGAGAACAGGAAAACAAAGGATTTGAAGGCTACAAGTGGTCATGAGCAGCTCATTCTTGACACCACCATACCTGATTCCTATTCAGTTGCTCGTGATAATGACTGTCAAGACTCTGAGGTTCCTGTTTCTATGAATGATGATGACTTGGAACAGCAGGAAGAGGAAGTTAGACGTAAACTTGAGCTAGAAGAGGAGGAAAAAAAACTGGAAGAAACTTTGGAGTTACAACGACGGATAGAAAATGAGGCTAAACAGAAGCACCTGGCTGAGCAACTAAAGAAATCCTCTGGGACATATTTAGAGAAATCAACTGACAAATTTCTGGATGGTCAATCAAAGGCTGTTGCTGACGGTCCAGATGTACATGAACATATGAGACCACCTATTTGGGAGCAGTTAGAAAGTGAGAATGGGTACCCTAGCAATCTAGATGGTGTGCTTGTTGGCCCAGCAAATGGTTCTGCAGTACCAAATAAATCTACACCTGATTCAGCTAATCAGAGGATTCATCATATGCATCAATCAAATGTTAGACGAGCAGATCTGTCAAACCGAGGAGTTCCTGAGAATGGTTTTCAGTTGCCTGAACAGCGCGCAGGCAGAAAGGGTAAACGGCATAAAAATTCTTCCACATTGGTTGATGGAAAGTTTGACGCTGTCTCATTGGAAAAGGAGAGTAATGAGCGTCCATATACTGATAATCAATCAAGAGAGAAGGTTAAATTCCACAACAATCAAGATGCTGACAGTGTGAGGGGAGACAATGGATTGAAGACTCTCAGAGAGTTGCAAGTGGAACATCATGAGGAGGAAAGATTCCAAGCTGATCTTAAAAAAGCTGTACGCCAAAGTCTGGACACATATCAAGCTCTTCAAAAATTGCCTCCAGTTTCTAGATTGAGATTGCCAGAGATACCTCCTTCACAAGTAGATTTGGGTGTTACGCGGGAGGAAAACACAACTGATAAAGTGAATGGAGGTACTTTGCTTGGTACTGGGCTGAAGAATGAAGTGGGTGAATATAACTGCTTTCTCAATGTTATAATACAATCTTTGTGGCATTTGCGACGTTTTCGGGAGGAATTTCTTGGCAGATCAAAACCAGAGCATGATCATGTCGGTAATCCTTGTGTTGTCTGTGCATTGTATGAAATCTTTTTTGCTATGGACATTGCATCAAAAGATTGCAGGGGAGAAGCAGTAGCACCTACTTCTCTGAGGATAGCTCTAAGCAACCTATGTCCAGATAGCAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAAGTTCTGGCAGTGTTATTTGACTGCCTTCATCAATCATTTACTCGTGGTTCAAGTGTTTCGGATACAGAATCAGTGGAAAGCAATTCTGTGGGATCTTGGGATTGTGCAAACAGTAGTTGCATAGCACATTCACTCTTTGGAATGGACATTTTTGAACGAATGAACTGCTATCATTGTGGTCTTGAGTCCAGAGATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCCAACTCCCTCCGGACTATGAAGGTAATGTGTAGTGAAAGCTCCTTTGATGAGCTTTTGAATTTAGTGGAGATGAATCATCAGTTGGCTTGTGATCCAGAAGCTGGCGGCTGTGGCAAGCTAAACTACATCCATCACTTTCTTTCAAGACCACCTCATGTTTTTATGACAGTTCTTGGTTGGCAAAATACATGCGAGAGTGCTGATGATATAACAGCAACTCTGGCAGCCCTGAGCACTGAGATGGATATCAGTGCCCTTTACCGTGGTTTAGACCCTAAAAGCACTCATAGCTTGGTTTCAGTGGTTTGCTACTATGGGCAACATTATCATTGCTTTGCCTATAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACAGTCAAGGTAATTGGTGGGTGGCTTGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTTTTCGAAGCTGTCAGTGTTGATACAGAATTTAAAAGGAAGGATGGTCCCTCTCCCCGCCCTTCTTCCCCCAGGGGGGGTGGTGGAGAATCATGTAACAAAGGTTTTTTAATGCTAGCGGGAGGAATTTGGACACTGAAGAGCCTAGGGAGTGGGGCTTGTTACCGAGGATCGCTCAACAGAATTGGGTCCATTCTGGAATATAACAGTCATTTCTTGTTTTTATCCAATAAGCAGCGGGAAGAATCACCAAAATATGTGGAGGGTGGCACAAATCAGGCCTGTGCAGCATGCAAATTTCAGAGAAGAAAGTGCACTCCCGAGTGTGTTCTTGCCCCATACTTCCCTGCGGACCAACCCAAGGCGTTTCAGAATGTCCACAAGTTATTTGGAGTCAGCAACATAGTAAAGATGTTAAAGAAATTAGATCCTAGCCAGAAGAAAATAGCTATGGACTCCATCATATGTCAAGCAAATTTCAGAGATAAATATCCTGTTCATGGTTGTTGGGAGGAAATTTGCAGGCTACGTTACCAAATATGGTATGTGGAAGAAGAGCTTTGCGCTGTTCATCAGCAACTTGAGATTTACAGACAACATTACCTGCAGCACCAAGGTTCTTCAATGGTTGATGATGTGACTTCACAATTAGAGTTGGGGATGGCACCTCATAATAATTGTGCCCTCCCACTCTTCAATCATACCCCAAATCCACAGACATATAATTCAGCGGCTGCTTTGCCTGTTTCCGAGCAACATTCTTACTGCAATAGCAATAGTGTGGCTTACAACTCCATGTACATGGAATCCAAGGATAATGTTGTTACAACAAATCCTTTGTGGGTTCAGCACCCTTGCGAAGATAACAATAGCAATTCGATGGCGATGCATTCCCAATCGCAGTTGGTTGCCTCGCAGCCACTAGACATTCAACAACAAGTTGTTGAAGAATATTATGATGAGATGAATCCATTTTTTGATACAATTGATGATAGACAATCATACATATATTCTAAAGAGGCTTACGAGTCAAGTTCAGAAGAATCATTGAAAGATTCGAGAAAGTGCATTGAGCAGGTTGCTGAAAATGAATTGAAGAATGCTGCCGCACACTTGAGCCTTACCAGCGTCAACTGA 6042 0.4263 MGHKKRNPAPRSKQSAAASPVTQSAIGGAAIGATSAEPEFCMSSNHTNHSATKIELPPQSEPSAYSAIKLECERALTALRRGNHTKALRLMKESCSRHESSAYSALIHRVQGTVCVKVASIIDDPSAKQRHLKNAIESARKAVELSPSSIEFAHFYANLLYEAANDANEYEHVVKECDRALSIENPIDPAKESLQDESQQKISTADARIAHVQNELRQLIQKSNIASLSTWMKNLGNGEDKIRLIPIRRASEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSQNEGDRTLDSSSASGQRLNERRKYGHVRKAGSTSERRDWVHSYWNSLSVDLKKELLRIRVCDLKSHFGSSKDTLLNDILAEALSYAEANKTWKFWLCCRCNEKFSDSESHMQHVVQEHMGNLLPKMQRLLPQNVENEWIEMILNCSWKPLDASAAVKMLENEAKYKDFSFPEDSYIDHHIEEHHDCFEDTTNSYPEKGHSLYTCTAERSNYCKTAETNIRDGVEVQGSIVYSLADGWPLSDDSERAKLLERMHAVLDMLIRHKYLAASHLSKVIQFTMDEIQGLAAGSQLLNHGLDQTPTCICFLGASQLKKILKFLQELSHACGLGRYAEKSNSPMDDLHNANQVPEIKEKIVLNADASYLLLDECFVPAELTPGAAEGAVVDDVIAPTSNDGVLHNTDPFLSWIFSCSSSGDQLTSWMRTKEDKRHQGIEIVQTLEKEFYHLQSLSEKKCERMSYEEALQVVEDLCLAEGKKRENFTEFVQRSYGSVLRKRREELIESENDVMYASNRFELDAITNVLQEAEAMNVNQFGYEETYAGTCDLESGEDDEWRMKEYLHQMDSYIEIAIQKLKEHLSVELSKIDARIMRNVSEMQQLELKLEPVSAHDYRAIILPLVKLYLRARLEDLAEKDAREKSDAAREAFLAELALDSKKVVKGGSDSTRHMEKTKDKKKNKENRKTKDLKATSGHEQLILDTTIPDSYSVARDNDCQDSEVPVSMNDDDLEQQEEEVRRKLELEEEEKKLEETLELQRRIENEAKQKHLAEQLKKSSGTYLEKSTDKFLDGQSKAVADGPDVHEHMRPPIWEQLESENGYPSNLDGVLVGPANGSAVPNKSTPDSANQRIHHMHQSNVRRADLSNRGVPENGFQLPEQRAGRKGKRHKNSSTLVDGKFDAVSLEKESNERPYTDNQSREKVKFHNNQDADSVRGDNGLKTLRELQVEHHEEERFQADLKKAVRQSLDTYQALQKLPPVSRLRLPEIPPSQVDLGVTREENTTDKVNGGTLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLGRSKPEHDHVGNPCVVCALYEIFFAMDIASKDCRGEAVAPTSLRIALSNLCPDSNFFQEAQMNDASEVLAVLFDCLHQSFTRGSSVSDTESVESNSVGSWDCANSSCIAHSLFGMDIFERMNCYHCGLESRDLKYTSFFHNINANSLRTMKVMCSESSFDELLNLVEMNHQLACDPEAGGCGKLNYIHHFLSRPPHVFMTVLGWQNTCESADDITATLAALSTEMDISALYRGLDPKSTHSLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKVIGGWLDVLTMCERGHLQPQVLFFEAVSVDTEFKRKDGPSPRPSSPRGGGGESCNKGFLMLAGGIWTLKSLGSGACYRGSLNRIGSILEYNSHFLFLSNKQREESPKYVEGGTNQACAACKFQRRKCTPECVLAPYFPADQPKAFQNVHKLFGVSNIVKMLKKLDPSQKKIAMDSIICQANFRDKYPVHGCWEEICRLRYQIWYVEEELCAVHQQLEIYRQHYLQHQGSSMVDDVTSQLELGMAPHNNCALPLFNHTPNPQTYNSAAALPVSEQHSYCNSNSVAYNSMYMESKDNVVTTNPLWVQHPCEDNNSNSMAMHSQSQLVASQPLDIQQQVVEEYYDEMNPFFDTIDDRQSYIYSKEAYESSSEESLKDSRKCIEQVAENELKNAAAHLSLTSVN 2013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0502 2013 Gene3D Cysteine proteinases 1290 1639 - -
Dere14g0502 2013 Pfam Protein of unknown function (DUF629) 341 866 IPR006865 -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 1008 1028 - -
Dere14g0502 2013 Coils Coil 202 222 - -
Dere14g0502 2013 Coils Coil 922 942 - -
Dere14g0502 2013 Coils Coil 1022 1062 - -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 1183 1229 - -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 292 332 - -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 293 319 - -
Dere14g0502 2013 ProSitePatterns Zinc finger C2H2 type domain signature. 398 419 IPR013087 -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 1159 1229 - -
Dere14g0502 2013 Pfam Ubiquitin carboxyl-terminal hydrolase 1309 1616 IPR001394 GO:0004843|GO:0016579
Dere14g0502 2013 MobiDBLite consensus disorder prediction 956 989 - -
Dere14g0502 2013 ProSiteProfiles LOB domain profile. 1728 1829 IPR004883 -
Dere14g0502 2013 SUPERFAMILY Cysteine proteinases 1308 1638 IPR038765 -
Dere14g0502 2013 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1640 - -
Dere14g0502 2013 Gene3D Tetratricopeptide repeat domain 54 221 IPR011990 GO:0005515
Dere14g0502 2013 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1308 1640 IPR028889 -
Dere14g0502 2013 Pfam Lateral organ boundaries (LOB) domain 1729 1825 IPR004883 -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 1 23 - -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 957 989 - -
Dere14g0502 2013 MobiDBLite consensus disorder prediction 40 59 - -
Dere14g0502 2013 Pfam Protein of unknown function (DUF627) 74 185 IPR006866 -
Dere14g0502 2013 CDD Peptidase_C19 1399 1638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0502 Dere-ChrDere14 5187848 5200350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0502 62 1638 C2H2 Transcription Factor Family AT3G47890 58.526 0.0 1742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere14g0502 DUF629 2.1e-159 No_clan