Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0479 ATGGAGTTTGCTTTGCGCAGATCTGGCCAAGGAGGTGAAGTCAAGGAAGAGAAGAGAAGTGAATCTGCTGGTGCTGAAGATCACGAGGCTCCTCATCGTAAAGAAGACACTCCTGTTGTCAAGGTGCCACCCATGAATACTACTGATAGATCCATCGTGGAGACTGGTCCCCCTCATGCGTCCCCAGCCAAAAAGGAAGAGGTTGATGAACTTGAATCTGCAAGAGTTGAGATGGGAGAGGTGAGAGAAGAAAACCAGAGGCTAAGGATGTGTCTGGAGCGAATAATGAAGGAATACGAGGCACTGCAAATGCAATTTCACGTTATATCCCAACAAGAAGCAACAAAATCTGCTCATCATAAAGAGAATGATGATAACCGTCAAGAGTTAACTGAGGAATCGGAGCTCGTTTCCCTCAGCCTTGGAAGAGCTCCGAGTAATCCAAAATCTGAGGAGAAAATTAAAGTCAGCTCTAAACCATCATTGCAGGAAGACGAAGATGAATTCAAAGAAGACTTGGCTCTTGGACTGGACTGCAAATTTGAGACATCAAAATCAGGAAGCACAACTGAAGCTTTGCCAAATCCAAGCCCCACCAATAGCTGTGAATTAGTGCCCAAGGAAGAAGCCGGAGAGAGTTGGCCACCTAGTAAGGTACTTAAGACTACCAGAGATTCCGGAGATCAAGATGAAGTTTCCCAACAAAATCCTGCTAAAAGAGCCAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACAATGAATGATGGATGCCAATGGAGGAAATATGGACAAAAGATATCAAAGGGAAATCCTTGTCCTAGAGCTTACTATCGTTGCACAGTTGCGGCTAATTGTCCAGTAAGGAAACAGGTGCAAAGATGTGCAGATGACATGTCGATTCTAATCACCACCTATGAAGGATCCCACAACCACCCTCTTCCTCTCTCTGCTACTGCTATGGCTTCCACCACTTCGGCAGCAGCTTCCATGCTCTTGTCTGGTTCATCTTCAACCTCTCACCTCCCTGGCTCTCTGCCTTCTTCAACAGCCACCACCACCATTGCCTCTGAACTCCATGGCATCAACTTCTACCTCTCAGACGGTTCCAAACCAAAGCAATTCTACCTCTCCAATCCTGCACTATCACCTTCACCCGCACACCCAACTATTACTCTCGACCTCACTTCAAATCCATCCTCTTCTAATGCCTCGTCCCACTTTAATAGATTCACCCCAAACTACAATAACCCCCCAAGATTCACTTCTTCCACCAGTCTCAACTTCAGTTCCTCAGAATCCAGTGCAATGACATGGAGCAACAACATTGGGTTCCTCGGCTACAGCTACAACACTCAACCATATAATAATAACAGGAACATCCTTAGCAGCATCAACCACGGAAGACAATTACCAATCCAAACTCCTTCACCTCAAGCACATCAAAATTCCTCACTACCAGACACTATAGCTGCAGCAACCAAAGTGATCACAGCTGACCCAACTTTTCAGTCAGCTTTAGCTGCTGCGCTTACTTCCATTATAGGCACAGGAAATAGTGGTAGTGGTAGTAACACACAAGGTGTTGGAGAAACAAATTTGGGTCAAAAAATTACACTATGGGGGGATATGTTTTCAGCTTCTGCTGCTGGGTCAACTTCCAAAGTCAATGGATGTGCTTCAAGCTTCCTGAGCAAAACGACGCCGGCTAGCACACAAACGGGAAGTAGTGGCTTGATGTTTCTGTCGCCATCTTTGCCATTTTCCAGCTCCAAGAGCGCGTCTGCGTTGTCTCCTGCTGATAATAGAGACAACTCCAATTCGTGA 1827 0.4603 MEFALRRSGQGGEVKEEKRSESAGAEDHEAPHRKEDTPVVKVPPMNTTDRSIVETGPPHASPAKKEEVDELESARVEMGEVREENQRLRMCLERIMKEYEALQMQFHVISQQEATKSAHHKENDDNRQELTEESELVSLSLGRAPSNPKSEEKIKVSSKPSLQEDEDEFKEDLALGLDCKFETSKSGSTTEALPNPSPTNSCELVPKEEAGESWPPSKVLKTTRDSGDQDEVSQQNPAKRARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAANCPVRKQVQRCADDMSILITTYEGSHNHPLPLSATAMASTTSAAASMLLSGSSSTSHLPGSLPSSTATTTIASELHGINFYLSDGSKPKQFYLSNPALSPSPAHPTITLDLTSNPSSSNASSHFNRFTPNYNNPPRFTSSTSLNFSSSESSAMTWSNNIGFLGYSYNTQPYNNNRNILSSINHGRQLPIQTPSPQAHQNSSLPDTIAAATKVITADPTFQSALAAALTSIIGTGNSGSGSNTQGVGETNLGQKITLWGDMFSASAAGSTSKVNGCASSFLSKTTPASTQTGSSGLMFLSPSLPFSSSKSASALSPADNRDNSNS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0479 608 MobiDBLite consensus disorder prediction 1 84 - -
Dere14g0479 608 Gene3D WRKY domain 239 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere14g0479 608 Pfam WRKY DNA -binding domain 255 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g0479 608 SMART WRKY_cls 254 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g0479 608 MobiDBLite consensus disorder prediction 148 166 - -
Dere14g0479 608 MobiDBLite consensus disorder prediction 112 169 - -
Dere14g0479 608 MobiDBLite consensus disorder prediction 184 202 - -
Dere14g0479 608 MobiDBLite consensus disorder prediction 184 239 - -
Dere14g0479 608 MobiDBLite consensus disorder prediction 9 39 - -
Dere14g0479 608 MobiDBLite consensus disorder prediction 60 84 - -
Dere14g0479 608 FunFam probable WRKY transcription factor 31 239 316 - -
Dere14g0479 608 SUPERFAMILY WRKY DNA-binding domain 247 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere14g0479 608 MobiDBLite consensus disorder prediction 588 608 - -
Dere14g0479 608 Coils Coil 64 105 - -
Dere14g0479 608 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 54 524 IPR044810 GO:0003700
Dere14g0479 608 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g0479 608 MobiDBLite consensus disorder prediction 114 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0479 Dere-ChrDere14 4948792 4952422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0479 78 577 WRKY Transcription Factor Family AT5G15130 41.978 7.85e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere14g0479 WRKY 6.8e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0894 03 13706763 13710595 Dere14g0479 14 4948792 4952422 ECH
Dere14g0479 14 4948792 4952422 Dere14g0479 14 4948792 4952422 ECH