Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0474 ATGATGAAATGTGATGCTACAAAAGTTCCTGACAGAAGCTGTCATTCCTATTCAAGCCAATTAGTGCCGGGATATGATAACAAAGGTAAATCTGAGACTCTTCCTGCCCCCAGATCTGAAGGTGACATACTTTCCTCACCAAATTTGAAGGCCTTCACATTCAGTGAACTTAAGAATGCTACTAGAAACTTTCGTTCTGATAGTCTAATTGGACAAGGGGGCTTTGGTGATGTCCACAAGGGGTGGATTGATGAGCAATCCCTCTGTGCTACTAAGCCTGGATCTGGAATGGTTGTGGCTGTGAAGAAGCTAAAACCTGAAGGTTTTCAAGGGCATAAGGAGTGGCTGTCTGAAGTCAATTATCTTGGCCAACTTCATCATCCAAATCTTGTCAAACTTATTGGATACTGCCTAGATGGGGATAACCGGCTTCTAGTATATGAGTACATGTCCAAAGGCAGCTTGGAGAATCATCTATTTCGCAGGGGCTCACAGCCACTTCCATGGGCAACAAGGATCAAAGTTGCCATTGGTGCTGCTCGAGGTCTCGCCTTTCTACATGATTCCAACCCACAAGTTATCTACCGTGATTTTAAGACTTCAAATATATTATTAGATTCGGACTTTAATGCAAAACTCTCGGACTTTGGATTGGCTAAGGCAGGGCCCACTGGTGATCGTTCCCATGTTTCAACTCAAGTCATGGGTACTCAAGGCTACGCTGCTCCTGAATATATTGCTACAGGTCGGCTAACTACAAGATGTGATGTCTATAGTTTTGGGGTTGTGCTTTTGGAACTACTATCAGGGCGCTGTGTGGTCGATAAAACAAAATCTGGAGTGGAACAAAATCTGGTAGATTGGGCAAAACCCTTCTTGGGTGATAGGAGGAAGCTATTTAGGATTATGGACACCAAGTTAGAAGGGCAGTACCCACAGAGGGCAGCTTATACAGCTGCAATCCTTGCATTACAGTGCATTAGTGAGGCCAAAATCAGACCACAGATGTCTGAGGTTTTGGCTACTCTGGAACAGCTACCAGCCCTCAGATCATCCGGTCCGGGTCGGAGGTCTGTCCCTTCTTTCCCCGGGAACTCACCTCTGAGTAATATTCATTATTCAACTGAGACAAAATCTGTATCTAGTAACCCAAGTGACAGCACTGCGGGATCTCCATTGCCATCCTCGAAATCCCCAAGAGGGGTTTCTGGTACACACACATTTAAAGCTATATGTACATACATGTCAGGAAAATCAATTCCAAGTCGAAGCTCTCCCACCCCAGTTAGTCAACGTCCATATTACGAAAGCTTCATTTCCCTCTTGCAAAGATGCAAAGGGAAACGCCAACTCAATCAAATTCATGCCCTTTTGATCATTTCAGGTCTCATTCAAAAGCCCTCTATAGCAAGCAAACTTGTTGCGTCTTTGGCCTTGAGTCCTCTTCCTGGCTCTACTTCTATAGCTCGTGTAATCGCTAATCGTATTCATGGTCTTGATACGTACACTTGGAACACACTCGCTAGAGGTTATTTGGAGGGAAACAACCCCGAAGAAGCCTTTTCAGTCTATTCCCACCTAAGAAGAAGAGCCATGCAGGTTGATAGTTACACCCTTCTATTTGCAATCAAAGCTTGTGAACTTAACATAATTCAAGGGGAACAGATGCATGCTCAAGTTTGCAAGCTGGGATTTTCGTGTGAGCTAATAATACGAACTGCCATTATGCAGATGTATGCGTCGGTTGATAAGATTTCTTACGCGGAACAATTGTTCGATGAAATGCCTCAAAGAGATTTGGTTATGCGGAACTCCCTTATTGCTTCATATGCTCAAAAGGGTTTCCCTTTGAAAGCACTTCAAGGTCTGCATAGTATGGTCAAGAACAATGTTAGGCCAAATGGGGTGACTGCAGTAAGTGTTCTTTCTTCTTGCTCTTCTATGAAAGCCTTGAAAGAGGGTAGAGTAGTTCATGGTTATGTGATTAGAAATCTCAATTATTTTGACGTTTTTCTTGACAATGCCTTGATTGGAATGTATTCAAATTGTGGGGATCTTTCCAATGCCCTCCGCATCTTTCAATTGATGCCTTCAAGAAATGTGGTTTCATGGACATCAATGATCAAGGGTTATATTCATAACAATTATCCACATGAGGCATTAAGTTTGTTCGCCAAGATGGAATCTGAAAATATGAGACCAGATGAGGTTATCGTGTTAGAGTTGATTTCAATGTGGTCCAAATTAGGAAGCTTTGAACTTGGAGTACAGATTGAACAGTATCTAGAGAATAACAAGATTAGTAAAGAGAACTACTCTATTGCAAATGCTTTAATGGACATGCATGCCAAATGTGGCAATATGAAGAAGGCTTGCCAAATCTTTGATGGGATGGTGCAGAAAACTCTAATATCTTGGACTACATTGATTAATGGGTTAGCAAGGCATGGCCATGGCATCCCAGCATTAGTCCGATTCTGTCAGATGCAAAGAGAAGGTTTTAAACCAGATAGTGTCATCTTCCTCAGCATCTTATTTGCTTGTAGCCATTCAGGTTTGGTAGATGAGGGATGGAAATGTTTTCAATCAATGATTAATGATTATCATTTGGAGCCATGGATGGAACACTACGGATGCATGGTGGATCTTTTCTGCAGGGCTGGGCTAGTGAAGGAGGCATTTGACTTTGCTGAGGCAATGCCATTAAAACCAGATACTGTGGTGTGGCGTATGTTGCTTGGAGCTTGTCAAAGGCAAGGTAATATCAACCTAGCAAATCGAGTTACAAAACTTCTACATGAAGCAGAGCCTAAAAGTATTGAAGATTATTTACTGCTGTCTAATTCTCGCGCAGCCATGGCAGGATGGACAGAAGTACAAGAACTTAGGGGAGAAACGAAAATTATAGGTTTAAGTAAACAGGATCCGGGCAGAAGTTTGGTGGAGGTAGTTTGTAATGTTTAA 2964 0.4248 MMKCDATKVPDRSCHSYSSQLVPGYDNKGKSETLPAPRSEGDILSSPNLKAFTFSELKNATRNFRSDSLIGQGGFGDVHKGWIDEQSLCATKPGSGMVVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGYCLDGDNRLLVYEYMSKGSLENHLFRRGSQPLPWATRIKVAIGAARGLAFLHDSNPQVIYRDFKTSNILLDSDFNAKLSDFGLAKAGPTGDRSHVSTQVMGTQGYAAPEYIATGRLTTRCDVYSFGVVLLELLSGRCVVDKTKSGVEQNLVDWAKPFLGDRRKLFRIMDTKLEGQYPQRAAYTAAILALQCISEAKIRPQMSEVLATLEQLPALRSSGPGRRSVPSFPGNSPLSNIHYSTETKSVSSNPSDSTAGSPLPSSKSPRGVSGTHTFKAICTYMSGKSIPSRSSPTPVSQRPYYESFISLLQRCKGKRQLNQIHALLIISGLIQKPSIASKLVASLALSPLPGSTSIARVIANRIHGLDTYTWNTLARGYLEGNNPEEAFSVYSHLRRRAMQVDSYTLLFAIKACELNIIQGEQMHAQVCKLGFSCELIIRTAIMQMYASVDKISYAEQLFDEMPQRDLVMRNSLIASYAQKGFPLKALQGLHSMVKNNVRPNGVTAVSVLSSCSSMKALKEGRVVHGYVIRNLNYFDVFLDNALIGMYSNCGDLSNALRIFQLMPSRNVVSWTSMIKGYIHNNYPHEALSLFAKMESENMRPDEVIVLELISMWSKLGSFELGVQIEQYLENNKISKENYSIANALMDMHAKCGNMKKACQIFDGMVQKTLISWTTLINGLARHGHGIPALVRFCQMQREGFKPDSVIFLSILFACSHSGLVDEGWKCFQSMINDYHLEPWMEHYGCMVDLFCRAGLVKEAFDFAEAMPLKPDTVVWRMLLGACQRQGNINLANRVTKLLHEAEPKSIEDYLLLSNSRAAMAGWTEVQELRGETKIIGLSKQDPGRSLVEVVCNV 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0474 987 ProSitePatterns Protein kinases ATP-binding region signature. 70 103 IPR017441 GO:0005524
Dere14g0474 987 ProSiteProfiles Protein kinase domain profile. 64 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0474 987 Gene3D Phosphorylase Kinase; domain 1 36 149 - -
Dere14g0474 987 NCBIfam pentatricopeptide repeat 702 736 IPR002885 -
Dere14g0474 987 NCBIfam pentatricopeptide repeat 776 800 IPR002885 -
Dere14g0474 987 NCBIfam pentatricopeptide repeat 804 838 IPR002885 -
Dere14g0474 987 NCBIfam pentatricopeptide repeat 502 530 IPR002885 -
Dere14g0474 987 Gene3D Tetratricopeptide repeat domain 768 977 IPR011990 GO:0005515
Dere14g0474 987 Gene3D Tetratricopeptide repeat domain 431 664 IPR011990 GO:0005515
Dere14g0474 987 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 382 983 IPR046960 GO:0003723|GO:0009451
Dere14g0474 987 FunFam Serine/threonine-protein kinase PBS1 150 358 - -
Dere14g0474 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Dere14g0474 987 FunFam Pentatricopeptide repeat-containing protein 774 987 - -
Dere14g0474 987 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 599 633 IPR002885 -
Dere14g0474 987 Pfam PPR repeat family 699 736 IPR002885 -
Dere14g0474 987 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 700 734 IPR002885 -
Dere14g0474 987 FunFam Pentatricopeptide repeat-containing protein 515 653 - -
Dere14g0474 987 Pfam PPR repeat 804 834 IPR002885 -
Dere14g0474 987 Pfam PPR repeat 776 801 IPR002885 -
Dere14g0474 987 Pfam PPR repeat 502 530 IPR002885 -
Dere14g0474 987 Pfam PPR repeat 573 599 IPR002885 -
Dere14g0474 987 Pfam PPR repeat 839 866 IPR002885 -
Dere14g0474 987 Pfam PPR repeat 876 900 IPR002885 -
Dere14g0474 987 Pfam PPR repeat 602 631 IPR002885 -
Dere14g0474 987 FunFam Pentatricopeptide repeat-containing protein chloroplastic 654 753 - -
Dere14g0474 987 MobiDBLite consensus disorder prediction 350 403 - -
Dere14g0474 987 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
Dere14g0474 987 MobiDBLite consensus disorder prediction 358 403 - -
Dere14g0474 987 Pfam Protein tyrosine and serine/threonine kinase 68 272 IPR001245 GO:0004672|GO:0006468
Dere14g0474 987 SUPERFAMILY Protein kinase-like (PK-like) 40 343 IPR011009 -
Dere14g0474 987 CDD STKc_IRAK 70 346 - -
Dere14g0474 987 FunFam Serine/threonine-protein kinase BIK1 31 149 - -
Dere14g0474 987 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Dere14g0474 987 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 802 836 IPR002885 -
Dere14g0474 987 Gene3D Tetratricopeptide repeat domain 665 764 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0474 Dere-ChrDere14 4916481 4921379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0474 8 362 Glycoside Hydrolase AT3G07070 49.728 7.65e-106 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere14g0474 PK_Tyr_Ser-Thr 5.3e-44 CL0016