Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0470 ATGTCTGGGCTAATATTATTTCGGAACTATATCATTTCTGGAAGTGACTTGATATGCCCCATACTTGAACAGCCTCCAACAAAAGCATCGTCTTCTTCGTTGGTCCCAGACTCAGCCATGGATTCGTTTAAAGTTTTCAGAGGCTACGGCAAAGTAAATGATCACCTCGAAGACCAGTCCAATCACCTCAAATCCTCCAACCTCAAACCCTTCTTCGCAGCAATTTCTTTGTTTACTATCCTCATCGTCACTCTGACCATCGCCGCCACGCTCGCATCTCTCATCCACTCCTCCAATTCCGGACCACCGGAACCTCAATCAGCCCCTTCCACCGCCGCCACCTCCATCAGAACCGTCTGCAACGTCACGCGCTTCCCGGCCTCCTGCTTCTCCAGCATTTCCGCCCTCCCCACTCCACCCCAAAACCCTAACGACCCCGAATCCATTCTCAAGCTCTCTGTTCAGGTCTCCCACAACGAACTTTCTAAGCTCTCCTCCTCCCTCAGAACCTTGGCTTCGAACTCCAACGCCCCTGCTCTGCCTGATTGCAAGGATCAGATCGACGACGCGCTGAGTCGACTCAACGACTCGCTGTCGGCTATGGAGGTAGCTCCCGGCGACAAGGTGTTGACGGATACGAAGATCAACGACATCCAGACGTGGATCAGCGCGGCTGTGACGGACCAGGAGACGTGTCTGGACGGATTGGAGGAGATGGAGTCGGCGGCGGTCGGGGTGGTGAAGGGGAAGATGCAGAGGTCGAGGGAGTACACAAGCAACAGCTTAGCCATCGTTGCAAACATTCGCACTTTATTGCAACACTTCAATACGACCCTCCATTGA 843 0.5338 MSGLILFRNYIISGSDLICPILEQPPTKASSSSLVPDSAMDSFKVFRGYGKVNDHLEDQSNHLKSSNLKPFFAAISLFTILIVTLTIAATLASLIHSSNSGPPEPQSAPSTAATSIRTVCNVTRFPASCFSSISALPTPPQNPNDPESILKLSVQVSHNELSKLSSSLRTLASNSNAPALPDCKDQIDDALSRLNDSLSAMEVAPGDKVLTDTKINDIQTWISAAVTDQETCLDGLEEMESAAVGVVKGKMQRSREYTSNSLAIVANIRTLLQHFNTTLH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0470 280 Gene3D Invertase/pectin methylesterase inhibitor family protein 113 269 IPR035513 -
Dere14g0470 280 PANTHER PECTINESTERASE INHIBITOR-LIKE 80 264 - -
Dere14g0470 280 Pfam Plant invertase/pectin methylesterase inhibitor 115 264 IPR006501 GO:0004857
Dere14g0470 280 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 115 268 IPR035513 -
Dere14g0470 280 NCBIfam pectinesterase inhibitor domain 92 267 IPR006501 GO:0004857
Dere14g0470 280 CDD PMEI-like_3 118 270 - -
Dere14g0470 280 SMART PMEI_2 111 264 IPR006501 GO:0004857
Dere14g0470 280 FunFam Pectinesterase 112 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0470 Dere-ChrDere14 4878587 4880490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0470 40 280 Carbohydrate Esterase AT1G53840 40.234 1.88e-39 143