Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0468 ATGGCGTCGAGTATAGGTATGATGGATAGTGCTTACTTTGTCGGCAGGAATGAGATTTTGACTTGGATCAACAACAGACTTCAACTCCATCTCTCCCGTATTGAGGAGGCTGCATCTGGTGCTGTACAATGCCAGATGATGGACATGACATATCCAGGGGTTGTTCCAATGCACAAGGTGAACTTTGATGCAAAATCGGAGTATGATATGATCCAGAATTACAAAATACTTCAGGAAGTATTCAACAAGCTGAAGATTGAGAAGCATATTGAAGTTAACAGGCTTGTTAAAGGCCGGCCTTTGGACAACCTGGAATTTCTACAATGGCTGAAACGTTACTGTGACTCTGTGAATGGCGGCATTATGAATGAGAACTATAATCCCGTGGAACGAAGGAGTAAGGGTGGAAAGGATAGAAATCTTAAGAGTTCTTTGAAGAGCTCAAAATCACTGCAAACAAATGTCAATAATAATCCTAGTTCAGGGGACACACTCAGTCCTAACAGAACCTCTGGGCCCAAGCAACTTAGGTCAAGTGGAACAGCAGGCGGGGCTAATTCTTCAGCAGAGATTCAAGCTTTGTCCAAGGAGATTACTGATCTCAAACTTTCTGTGGATGTCCTGGAAAAAGAAAGAGACTTTTACTTTGCAAAACTAAGGGATATAGAAATTCTATGTCAAACTCCACAACTGGAGAATGTACCTATTTCTATAGCAATTAAGAAGATTTTGTATGCTGCCGAAGCAAAGGAATCAGCATTAGATGAAGCTCAGGATTACCTTAATCAAGCTTTGGAAACTGTTGAAGCTGAAGCTGAGGTTGAAGCAGAAAATGAAGCCTGA 843 0.414 MASSIGMMDSAYFVGRNEILTWINNRLQLHLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKSEYDMIQNYKILQEVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRSKGGKDRNLKSSLKSSKSLQTNVNNNPSSGDTLSPNRTSGPKQLRSSGTAGGANSSAEIQALSKEITDLKLSVDVLEKERDFYFAKLRDIEILCQTPQLENVPISIAIKKILYAAEAKESALDEAQDYLNQALETVEAEAEVEAENEA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0468 280 MobiDBLite consensus disorder prediction 130 144 - -
Dere14g0468 280 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Dere14g0468 280 Pfam EB1-like C-terminal motif 208 246 IPR004953 GO:0008017
Dere14g0468 280 Gene3D - 183 271 - -
Dere14g0468 280 Gene3D - 6 134 IPR036872 -
Dere14g0468 280 FunFam RP/EB family microtubule-associated protein 6 134 - -
Dere14g0468 280 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Dere14g0468 280 Coils Coil 191 211 - -
Dere14g0468 280 FunFam Microtubule-associated protein RP/EB family member 1B 189 264 - -
Dere14g0468 280 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 6 259 IPR027328 GO:0008017
Dere14g0468 280 Coils Coil 247 267 - -
Dere14g0468 280 SUPERFAMILY EB1 dimerisation domain-like 190 249 IPR036133 GO:0008017
Dere14g0468 280 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 183 253 IPR004953 GO:0008017
Dere14g0468 280 MobiDBLite consensus disorder prediction 125 187 - -
Dere14g0468 280 MobiDBLite consensus disorder prediction 145 187 - -
Dere14g0468 280 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0468 Dere-ChrDere14 4869640 4873316 Dispersed/Wgd