Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0465 ATGGACGGAGGTGATGATCTCCATCACCACCACCAACAGCAACATCATCACCGTCCAAACTTCCCATTCCAACTGCTGGAGAAGAAAGAAGATCCTCAAGAAGCTGCTTCCTGTTCCACCTCATCCCCTTACCCTTCCTTAGCCATCTCCGCCGAACCCACTACTTCCAATTCCAACCGATCCATCCAGGTCCTTAACGTCCCCCCTACTTCCTCCTCCTCCGAACCCTCCAATAAAAAGCCCCCACCGAAAAGAACCTCCACCAAGGACCGCCACACCAAGGTCGACGGCCGTGGCCGCCGCATCCGAATGCCTGCGCTGTGTGCCGCCAGGGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCTGATGGGGAAACCATCGAATGGTTACTCCAGCAGGCCGAGCCAGCCGTCATCGCCGCCACGGGCACCGGAACGATCCCCGCTAACTTCACTTCCCTTAATATCTCCCTGAGAAGCTCCGGCTCCACCATGTCCGTCCCTTCTCAGCTAAGATCGTCATACTTCAATCCGAACTTTTCAGTTCAACAGCGGAGAAGCTTGTTCCCTGGAATCGGCTTGTCTTCCGATAGCAACAACACTTCAACGCTGCTGAATTTTCAGTCCAATAATTTCGCTGGCGGAAGTATGTTGCAAGCGAAGCAGGAATTGCGCGGAGGTGACGGTGGTGCTCCGTCTCCGTCTACGACAACTTTGGATTTGTCGGAGGCAGAAGAAGGTATGGGAAGGAAAAGGCGACCGACAGAGCAAGACTTGTCGCCGTCGACGTCGGCGCAGCAATATCAAATGGGTAGTTATTTGTTGCAATCGAGCGCGGGAGCGATTCCGTCAAGTCACGCGCAGATTCCGGCAAATATATGGATGGTGACGAATTCGAATAACCAAGTTATGAGCGGGGATCCTATATGGACATTCCCACCGGTGAATAATAGTGCTTTGTATAGAGGCGCCACCATGTCCAGTGGGTTACATTTTATGAACTTCCCCACACCTATGGCCTTGTTGCCTAGTCAGCAATTAGGCTCATCTGGGATTGGTGGCGGCGGCGGCGGCGGCAGCGGAGGTGGGAATATAAATGAAGGACATTTGAGCATGCTTGCTGGGCTTAACCCATACAGGCCGGTGATCGGCGTTTCGGAGTCTCAGGCAAGTGGGTCTCAATCACATCACGGTGGAGGCGGCGATGATCGACAAGATACCACCAGTCACCGCTCCTAG 1242 0.5419 MDGGDDLHHHHQQQHHHRPNFPFQLLEKKEDPQEAASCSTSSPYPSLAISAEPTTSNSNRSIQVLNVPPTSSSSEPSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSLFPGIGLSSDSNNTSTLLNFQSNNFAGGSMLQAKQELRGGDGGAPSPSTTTLDLSEAEEGMGRKRRPTEQDLSPSTSAQQYQMGSYLLQSSAGAIPSSHAQIPANIWMVTNSNNQVMSGDPIWTFPPVNNSALYRGATMSSGLHFMNFPTPMALLPSQQLGSSGIGGGGGGGSGGGNINEGHLSMLAGLNPYRPVIGVSESQASGSQSHHGGGGDDRQDTTSHRS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0465 413 ProSiteProfiles TCP domain profile. 88 142 IPR017887 -
Dere14g0465 413 Pfam TCP family transcription factor 86 198 IPR017887 -
Dere14g0465 413 MobiDBLite consensus disorder prediction 82 99 - -
Dere14g0465 413 MobiDBLite consensus disorder prediction 35 81 - -
Dere14g0465 413 MobiDBLite consensus disorder prediction 387 413 - -
Dere14g0465 413 MobiDBLite consensus disorder prediction 222 267 - -
Dere14g0465 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 402 IPR005333 GO:0003700
Dere14g0465 413 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0465 Dere-ChrDere14 4841813 4843054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0465 79 407 TCP Transcription Factor Family AT3G47620 44.903 1.21e-63 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere14g0465 TCP 4.1e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0465 14 4841813 4843054 Dere14g0465 14 4841813 4843054 ECH