Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0458 ATGAAGAAGAGACAGGTGGTTGTGAAGAGAGACGTGGCCAAAACGTCGTCGTCGGTGGTGAGGAACGTGAGGTATATGGAGTGCCAAAAGAATCACGCAGCCAATATGGGAGGGTACGCTGTGGATGGATGCAGGGAGTTCATGGCGAGTGGAGAGGACGACGCAGGTGGGGCTCTTACGTGTGCTGCTTGCGGCTGTCACCGGAATTTCCACCGAAGAGAAGTTCAAACCGAGGTCGTCTGTGAGTACTCTCCTCCTAATTCTGCTCGCTAG 273 0.5421 MKKRQVVVKRDVAKTSSSVVRNVRYMECQKNHAANMGGYAVDGCREFMASGEDDAGGALTCAACGCHRNFHRREVQTEVVCEYSPPNSAR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0458 90 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
Dere14g0458 90 Pfam ZF-HD protein dimerisation region 22 75 IPR006456 -
Dere14g0458 90 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 75 IPR006456 -
Dere14g0458 90 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0458 Dere-ChrDere14 4712528 4712800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0458 1 88 Zinc finger-homeobox gene family AT1G18835 78.652 5.75e-44 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dere14g0458 ZF-HD_dimer 3.7e-29 No_clan