Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0455 ATGGAGGACCACATCGTTGTGTCTCTTGATCACCTTAATGAACATGCTGGTTTGCAGGCACTGAATGATGCTGATGCCCAATTATCATCCAATGAGGGTTCCAGCTCTCAGATTGCTGATGCACATGCCAGTGCTATTCATGTCGTAGAAGTTGGTGAATGTGATACATTGGACGAAGAACACCTTATTGAAACAGTAGAATGTCGCATTTGCCTGGAGGAGGACAACCTTAATAATTTGGACATTCCCTGTGCTTGCAGGGGCACCTTGAAGTTTGCTCACAGGAGATGTGTTCAACTATGGTGCAATGAAAAGGGAGATACGATTTGTGAGATTTGCCGCCAGGTAACCTCTTTGCAACCACGGAATAGTCGGACAGTCCCTGGTACCCCTTTAGATTTGCATGATCCTCAAATTTGGGCAATTGCAGCTGTGGAGCACCATCTTCTGGAAGCTGAGCATGATGACTATGTCAGTGCTAGCATCAGTGCACTTACATATTGCTGGTCTGCTATTCTAATTTTAATGACTCTTTTACTTATGAGGTATGCTGCTTCCTTCTTCAATAGCGACGTGGAGAAAGTTTTAACCTATATTTTTCTAATCATGTTTCGTGCTGCTGCTTTAACTCTTCCTTGCTATCTTATGGCTAGAACCGTTCATATAATGCAGAATCAGCGGCGAAGACAAGTTACTACTCCCTGCTTGCTCTATTATTCCTTTTCTTTCTTTCCTATTTTACTTTGA 747 0.4284 MEDHIVVSLDHLNEHAGLQALNDADAQLSSNEGSSSQIADAHASAIHVVEVGECDTLDEEHLIETVECRICLEEDNLNNLDIPCACRGTLKFAHRRCVQLWCNEKGDTICEICRQVTSLQPRNSRTVPGTPLDLHDPQIWAIAAVEHHLLEAEHDDYVSASISALTYCWSAILILMTLLLMRYAASFFNSDVEKVLTYIFLIMFRAAALTLPCYLMARTVHIMQNQRRRQVTTPCLLYYSFSFFPILL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0455 248 Pfam Protein of unknown function (DUF3675) 117 220 IPR022143 -
Dere14g0455 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 126 IPR013083 -
Dere14g0455 248 ProSiteProfiles Zinc finger RING-CH-type profile. 60 120 IPR011016 GO:0008270
Dere14g0455 248 CDD RING_CH-C4HC3_MARCH 68 114 - -
Dere14g0455 248 Pfam RING-variant domain 68 113 IPR011016 GO:0008270
Dere14g0455 248 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 230 IPR033275 -
Dere14g0455 248 SUPERFAMILY RING/U-box 64 116 - -
Dere14g0455 248 SMART ringv_2 67 114 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0455 Dere-ChrDere14 4681167 4683527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0455 67 116 C3H Transcription Factor Family AT2G37950 39.623 4.68e-08 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0455 14 4681167 4683527 Dere14g0455 14 4681167 4683527 ECH